Query= MSMg01no438_e23.b1 MSMg01no438_e23.b1 CHROMAT_FILE:
MSMg01no438_e23.b1 PHD_FILE: MSMg01no438_e23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:03 2005
(622 letters)
>mm_chr14_21339837_21340858
Length = 1022
Score = 1174 bits (607), Expect = 0.0
Identities = 616/619 (99%), Gaps = 1/619 (0%)
Strand = Plus / Plus
Query: 5 gaattctttttgct-tgccacattatttacttcttgtagactgggtcttacttatagccc 63
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctttttgcaatgacacattatttacttcttgtagactgggtcttacttatagccc 263
Query: 64 tgtctggcccagaactcactatgtagactagatcagcctcgaactcatagagatctactt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgtctggcccagaactcactatgtagactagatcagcctcgaactcatagagatctactt 323
Query: 124 gcctagacctcctgcatgctgagagtaaggacatgtgcaaccatgtccagtttaaaatat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcctagacctcctgcatgctgagagtaaggacatgtgcaaccatgtccagtttaaaatat 383
Query: 184 gtaaaaatataaaatttttaataattattaataaaaaattcagattcctttctgaatgct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtaaaaatataaaatttttaataattattaataaaaaattcagattcctttctgaatgct 443
Query: 244 tgttttactttataatccaatgatgaacatatattgctactaaatgcaaaattgtgaata 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgttttactttataatccaatgatgaacatatattgctactaaatgcaaaattgtgaata 503
Query: 304 tcaatttttatggaaaacacagaagggccatgagcaattttctagttcttttttaaagtg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tcaatttttatggaaaacacagaagggccatgagcaattttctagttcttttttaaagtg 563
Query: 364 cacaaagttgagacattaaagaagatccttttaactgtaggcaatctaataagaacagct 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cacaaagttgagacattaaagaagatccttttaactgtaggcaatctaataagaacagct 623
Query: 424 aaattcaatagagcaaacaaataaaaaactcaccaatttagaaattatgagtgtataagt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aaattcaatagagcaaacaaataaaaaactcaccaatttagaaattatgagtgtataagt 683
Query: 484 gtatttcttacacttagtttataaaatcagatgaactatttcgaaggagtattttacttc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gtatttcttacacttagtttataaaatcagatgaactatttcgaaggagtattttacttc 743
Query: 544 atttaggaaaaaaactaatttattaaaataaccagaagagaataatggtataactaaata 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 atttaggaaaaaaactaatttattaaaataaccagaagagaataatggtataactaaata 803
Query: 604 ctcccagaatatatattca 622
|||||||||||||||||||
Sbjct: 804 ctcccagaatatatattca 822
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no438_e23.g1 MSMg01no438_e23.g1 CHROMAT_FILE:
MSMg01no438_e23.g1 PHD_FILE: MSMg01no438_e23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:03 2005
(450 letters)
>mm_chr14_21420745_21421594
Length = 850
Score = 839 bits (434), Expect = 0.0
Identities = 446/450 (99%), Gaps = 2/450 (0%)
Strand = Plus / Minus
Query: 1 atctcctgagtgttgggatgcacaaccacacctagcccgacgtctgaattcttagttttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 atctcctgagtgttgggatgcacaaccacacctagcccgacgtctgaattcttagttttt 778
Query: 61 ttcatgactgcctaggtgtaatttagtttccttttagcttaaagtagaaattatgagcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 ttcatgactgcctaggtgtaatttagtttccttttagcttaaagtagaaattatgagcta 718
Query: 121 aatagtcttgaatgttctaatttgcattaattatatgcaatagttaggtttttatttatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 717 aatagtcttgaatgttctaatttgcattaattatatgcaatagttaggttttt-ttt-tt 660
Query: 181 tatttttttgatagtttcttttgttgtcaagattagcctagactggccttgaattcatta 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 tttttttttgatagtttcttttgttgtcaagattagcctagactggccttgaattcatta 600
Query: 241 cttagctgaggatgcttctctggacgatacctccgttgtatgcggggttgcaggcattca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 cttagctgaggatgcttctctggacgatacctccgttgtatgcggggttgcaggcattca 540
Query: 301 ctattaaacagttttatttgatgctggggtcaaacctagtgctctgtggatgacaggcga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ctattaaacagttttatttgatgctggggtcaaacctagtgctctgtggatgacaggcga 480
Query: 361 gcactttaccaacagagctacccagcctttacttgctattgttttggaagcattttggtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gcactttaccaacagagctacccagcctttacttgctattgttttggaagcattttggtt 420
Query: 421 tttttgttttggtatttatgcttccctggc 450
||||||||||| ||||||||||||||||||
Sbjct: 419 tttttgttttgttatttatgcttccctggc 390
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
