Query= MSMg01no438_f24.b1 MSMg01no438_f24.b1 CHROMAT_FILE:
MSMg01no438_f24.b1 PHD_FILE: MSMg01no438_f24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:08 2005
(387 letters)
>mm_chr14_21339867_21340653
Length = 787
Score = 719 bits (372), Expect = 0.0
Identities = 383/387 (98%)
Strand = Plus / Plus
Query: 1 tacttcttgnagactgggtcttacttatagccctgtctggcccttaactcactatgtaga 60
||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 tacttcttgtagactgggtcttacttatagccctgtctggcccagaactcactatgtaga 260
Query: 61 ctagatcagcctcgaactcatagagatctacttgcctagacctcctgcatgctgagagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctagatcagcctcgaactcatagagatctacttgcctagacctcctgcatgctgagagta 320
Query: 121 aggacatgtgcaaccatgtccagtttaaaatatgtaaaaatataaaatttttaataatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggacatgtgcaaccatgtccagtttaaaatatgtaaaaatataaaatttttaataatta 380
Query: 181 ttaataaaaaattcagattcctttctgaatgcttgttttactttataatccaatgatgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaataaaaaattcagattcctttctgaatgcttgttttactttataatccaatgatgaa 440
Query: 241 catatattgttactaaatgcaaaattgtgaatatcaatttttatggaaaacacagaaggg 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catatattgctactaaatgcaaaattgtgaatatcaatttttatggaaaacacagaaggg 500
Query: 301 ccatgagcaattttctagttcttttttaaagtgcacaaagttgagacattaaagaagatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccatgagcaattttctagttcttttttaaagtgcacaaagttgagacattaaagaagatc 560
Query: 361 cttttaactgtaggcaatctaataaga 387
|||||||||||||||||||||||||||
Sbjct: 561 cttttaactgtaggcaatctaataaga 587
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 787
Length adjustment: 9
Effective length of query: 378
Effective length of database: 778
Effective search space: 294084
Effective search space used: 294084
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no438_f24.g1 MSMg01no438_f24.g1 CHROMAT_FILE:
MSMg01no438_f24.g1 PHD_FILE: MSMg01no438_f24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:08 2005
(426 letters)
>mm_chr14_21420769_21421594
Length = 826
Score = 801 bits (414), Expect = 0.0
Identities = 423/426 (99%), Gaps = 2/426 (0%)
Strand = Plus / Minus
Query: 1 atctcctgagtgttgggatgcacaaccacacctagcccgacgtctgaattcttagttttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 atctcctgagtgttgggatgcacaaccacacctagcccgacgtctgaattcttagttttt 754
Query: 61 ttcatgactgcctaggtgtaatttagtttccttttagcttaaagtagaaattatgagcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 ttcatgactgcctaggtgtaatttagtttccttttagcttaaagtagaaattatgagcta 694
Query: 121 aatagtcttgaatgttctaatttgcattaattatatgcaatagttaggtttttatttatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 693 aatagtcttgaatgttctaatttgcattaattatatgcaatagttaggttttt-ttt-tt 636
Query: 181 tatttttttgatagtttcttttgttgtcaagattagcctagactggccttgaattcatta 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 tttttttttgatagtttcttttgttgtcaagattagcctagactggccttgaattcatta 576
Query: 241 cttagctgaggatgcttctctggacgatacctccgttgtatgcggggttgcaggcattca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 cttagctgaggatgcttctctggacgatacctccgttgtatgcggggttgcaggcattca 516
Query: 301 ctattaaacagttttatttgatgctggggtcaaacctagtgctctgtggatgacaggcga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ctattaaacagttttatttgatgctggggtcaaacctagtgctctgtggatgacaggcga 456
Query: 361 gcactttaccaacagagctacccagcctttacttgctattgttttggaagcattttggtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gcactttaccaacagagctacccagcctttacttgctattgttttggaagcattttggtt 396
Query: 421 tttttg 426
||||||
Sbjct: 395 tttttg 390
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
