Query= MSMg01no438_n07.b1 MSMg01no438_n07.b1 CHROMAT_FILE:
MSMg01no438_n07.b1 PHD_FILE: MSMg01no438_n07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:45 2005
(410 letters)
>mm_chr14_71336989_71337797
Length = 809
Score = 725 bits (375), Expect = 0.0
Identities = 398/407 (97%), Gaps = 5/407 (1%)
Strand = Plus / Plus
Query: 6 gaattcttgggact--ttcgctgctattttccctaggtgaaggggagctgtaagccagaa 63
|||||||||||||| | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcttgggactggt--g-tgctattttccctaggtgaaggggagctgtaagccagaa 262
Query: 64 ttaagcagctgctattgtcactacagcaggcaggaggttttcctgtttgttgctgggact 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ttaagcagctgctattgtcactacagcaggcaggaggttttcctgtttgttgctgggact 322
Query: 124 gctctctgctgagtggtctttacggagggcagagcttgcttccctctgactaccccagtg 183
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gctctctgctgagtggtcattacggagggcagagcttgcttccctctgactaccccagtg 382
Query: 184 ctctaccaggactggcctgagcatctttagaaagatgcggagaccttcttagccgtcatc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ctctaccaggactggcctgagcatctttagaaagatgcggagaccttcttagccgtcatc 442
Query: 244 ctgagactttaggaaagatgatgcccaaagcagaatagctgataaatatatctgtgtgtt 303
| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 443 ccgagactttaggaaagatgatgcccaaagcagaatagctgagaaatatatctgtgtgtt 502
Query: 304 gatatcactaaatcaccaactggctagttgtgtcagaaaaggggctgttgagagacgtag 363
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gatatctctaaatcaccaactggctagttgtgtcagaaaaggggctgttgagagacgtag 562
Query: 364 aaaaagatatgagagcatgttgattatactgagtttctgagggctga 410
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aaaaagatatgagagcatgttgattatactgagtttctgagggctga 609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 809
Length adjustment: 9
Effective length of query: 401
Effective length of database: 800
Effective search space: 320800
Effective search space used: 320800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no438_n07.g1 MSMg01no438_n07.g1 CHROMAT_FILE:
MSMg01no438_n07.g1 PHD_FILE: MSMg01no438_n07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:45 2005
(332 letters)
>mm_chr14_71480998_71481729
Length = 732
Score = 642 bits (332), Expect = 0.0
Identities = 332/332 (100%)
Strand = Plus / Minus
Query: 1 catggagaccatatggagacctgaatgtggctaggaggattagccaactgtagttagctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 catggagaccatatggagacctgaatgtggctaggaggattagccaactgtagttagctg 473
Query: 61 tcctccagggactgatgatcctccagggagttaagtcaagggatcctgcaagtcactctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 tcctccagggactgatgatcctccagggagttaagtcaagggatcctgcaagtcactctc 413
Query: 121 acaggtgaccttgaactttaagggtataaagcattgtgcctaccatctaatgaaagaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 acaggtgaccttgaactttaagggtataaagcattgtgcctaccatctaatgaaagaaag 353
Query: 181 aaacctctaccaagaacttcctagaactaaaaggtcagggactgtctaatttatttttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 aaacctctaccaagaacttcctagaactaaaaggtcagggactgtctaatttatttttta 293
Query: 241 aacccaattcaaggtaatactggcccagagatagggcaagggagctgggaagtaacaacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 aacccaattcaaggtaatactggcccagagatagggcaagggagctgggaagtaacaacc 233
Query: 301 atgttgtcttcagaggtgggatttccttcttc 332
||||||||||||||||||||||||||||||||
Sbjct: 232 atgttgtcttcagaggtgggatttccttcttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
