Query= MSMg01no438_p03.b1 MSMg01no438_p03.b1 CHROMAT_FILE:
MSMg01no438_p03.b1 PHD_FILE: MSMg01no438_p03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:54 2005
(498 letters)
>mm_chr14_123198764_123199661
Length = 898
Score = 888 bits (459), Expect = 0.0
Identities = 478/487 (98%), Gaps = 7/487 (1%)
Strand = Plus / Minus
Query: 5 gaattccagggcagtcccc---gctattatacagagaaacctgtcttg-aaaaaaacaaa 60
|||||||||||||| || |||||||||||||||||||||||||| |||||||||||
Sbjct: 710 gaattccagggcag---ccagggctattatacagagaaacctgtcttgaaaaaaaacaaa 654
Query: 61 acaaaaataaattaaaaaccagcttgttataatttattattgaatgctagctgttgacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 acaaaaataaattaaaaaccagcttgttataatttattattgaatgctagctgttgacaa 594
Query: 121 atgactttgccttgggacaagtttgtctgtaaactgcctgagccacatcaggtgttctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 atgactttgccttgggacaagtttgtctgtaaactgcctgagccacatcaggtgttctca 534
Query: 181 tctgggaggggacatcaatgcaccatcattctgcatctccctgccctacaagaagggctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 tctgggaggggacatcaatgcaccatcattctgcatctccctgccctacaagaagggctc 474
Query: 241 cactcattcccaggcaaacagaagtaaatgcataataattaacatataatgagcttagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 cactcattcccaggcaaacagaagtaaatgcataataattaacatataatgagcttagca 414
Query: 301 caataaatgcactaattataccaaatgagtgtataaccagacataaaaagtactaacagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 caataaatgcactaattataccaaatgagtgtataaccagacataaaaagtactaacagg 354
Query: 361 ttccttgactttgcattcagtttacagcaggtcaaaactacacagaagatgactatagct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ttccttgactttgcattcagtttacagcaggtcaaaactacacagaagatgactatagct 294
Query: 421 tgcttgcttgcttccttctttcctttcttctcctctctctctctctctctctctctctct 480
||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tgcttgcttgcttgcttccttcctttcttctcctctctctctctctctctctctctctct 234
Query: 481 ctctctc 487
|||||||
Sbjct: 233 ctctctc 227
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 58
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space: 433344
Effective search space used: 433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no438_p03.g1 MSMg01no438_p03.g1 CHROMAT_FILE:
MSMg01no438_p03.g1 PHD_FILE: MSMg01no438_p03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:55 2005
(442 letters)
>mm_chr14_122996335_122997176
Length = 842
Score = 855 bits (442), Expect = 0.0
Identities = 442/442 (100%)
Strand = Plus / Plus
Query: 1 agattgtcatgcttggtggctagtgtctttacccactttgccatctcacaggccacacgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agattgtcatgcttggtggctagtgtctttacccactttgccatctcacaggccacacgg 260
Query: 61 aacccatatttgttagtgtatgaatactcttaaaaaaaagggaattatattcctgaggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacccatatttgttagtgtatgaatactcttaaaaaaaagggaattatattcctgaggtc 320
Query: 121 ttcactctttatcataacatttaaagacaataataaattaaaaagtgaattgtagaggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcactctttatcataacatttaaagacaataataaattaaaaagtgaattgtagaggaa 380
Query: 181 gacagaaaggcagtaatgaggctatataaaacaagaaagcgagcaaaaccagattgatcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacagaaaggcagtaatgaggctatataaaacaagaaagcgagcaaaaccagattgatcg 440
Query: 241 tattcatgctacaactggatgagtcttctccccttcatatctgtaactgttttgagccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tattcatgctacaactggatgagtcttctccccttcatatctgtaactgttttgagccag 500
Query: 301 gcacctgtccaagcactcagcatgcatgaattcctttgctctccaaaacagcccaacggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcacctgtccaagcactcagcatgcatgaattcctttgctctccaaaacagcccaacggg 560
Query: 361 tgggtatagttttttctctttacaggtgaagaagcagaagttgctcaaggtcacacagct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgggtatagttttttctctttacaggtgaagaagcagaagttgctcaaggtcacacagct 620
Query: 421 gctgtgtcagtcattgcttatc 442
||||||||||||||||||||||
Sbjct: 621 gctgtgtcagtcattgcttatc 642
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
