Query= MSMg01no439_b05.b1 MSMg01no439_b05.b1 CHROMAT_FILE:
MSMg01no439_b05.b1 PHD_FILE: MSMg01no439_b05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:05 2005
(503 letters)
>mm_chr14_23565275_23566178
Length = 904
Score = 913 bits (472), Expect = 0.0
Identities = 493/500 (98%), Gaps = 1/500 (0%)
Strand = Plus / Minus
Query: 5 gaattcactagtttcaccagtgctttgaactgttaag-aaaaaaacgtacccctggatat 63
||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 704 gaattcactagtttcaccagtgctttgaactgttaagaaaaaaaaagtacccctggatac 645
Query: 64 gatggatgtgatggatgtgatactgcagaaagtcccggctgagttagctcccttccctgc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 gatggatgtgatggatgtgatactgcagaaagtcccggctgagttagctcccttccctgc 585
Query: 124 tagtcttccctttgctctgggattggacgtgattctctttccctcacttaatttcccact 183
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 584 tagtcttccctttgctctgggattggacgtgattttctttccctcacttaatttcccact 525
Query: 184 tggaatttgtatatagactctgataaggaaccccttaaactcaaactaagagagtgcaag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 tggaatttgtatatagactctgataaggaaccccttaaactcaaactaagagagtgcaag 465
Query: 244 atttttgtggctagaactgtaatgtaatgtaaataacctgatctcccagtcaactgtgcc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 atttttgtggctagaactgtaatgtaatgtaaataacctgatctcccagtcaactgtgcc 405
Query: 304 tgtcaggagggtacgtgtgatcctagccaccacagcccctcacagacctttgttctccat 363
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 404 tgtcaggagggtacgtgtgatcctagctaccacagcccctcacagacctttgttctccat 345
Query: 364 tagcgaggtgctagtcccaccagcgaggatggttttatgacttggcataagcttctgctg 423
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tagcgaggtgctagttccaccagcgaggatggttttatgacttggcataagcttctgctg 285
Query: 424 cttcccaggcgcagcgaggggagttagttcagggcccttgaagacttcttttgttctgcc 483
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 cttcccaggcgcagcaaggggagttagttcagggcccttgaagacttcttttgttctgcc 225
Query: 484 aagttagggaggaaagaagg 503
||||||||||||||||||||
Sbjct: 224 aagttagggaggaaagaagg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 904
Length adjustment: 10
Effective length of query: 493
Effective length of database: 894
Effective search space: 440742
Effective search space used: 440742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no439_b05.g1 MSMg01no439_b05.g1 CHROMAT_FILE:
MSMg01no439_b05.g1 PHD_FILE: MSMg01no439_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:05 2005
(241 letters)
>mm_chr14_23427202_23427842
Length = 641
Score = 458 bits (237), Expect = e-133
Identities = 240/241 (99%)
Strand = Plus / Plus
Query: 1 caagcttggtgtagtagcatggcttggttcaggagctgactctcttactcctaaggtcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caagcttggtgtagtagcatggcttggttcaggagctgactctcttactcctaaggtcta 260
Query: 61 ggtatggagaaaaccaaaaggatatcttttctgttcttatagaccacatgaccacggcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtatggagaaaaccaaaaggatatcttttctgttcttatagaccacatgaccacggcct 320
Query: 121 catttaaccttaatgatctcctggggggctaggttggattttaagatttcaacaaataaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catttaaccttaatgatctcctggggggctaggttggattttaagatttcaacaaataaa 380
Query: 181 tttgaataggacacattgcagccccaaatggagagagcccagtctcttctcccaccctgc 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttgaataggacacattgcagctccaaatggagagagcccagtctcttctcccaccctgc 440
Query: 241 c 241
|
Sbjct: 441 c 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
