TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGGATCCGCGGA
ATTCATAGATACTTCTCAAAAAATAAAAAGAGAGACACGGTTAGAGCTGA
GGATGTAACTGGGTGGTAGAATGCTTACCTTATACGTACAAGACCCTGTA
TTGGGTTCCCAATTCAGAAAAATAATCATTATTAAAGCTGCACCATGGGC
TACATGTGAACAACAGGTTGACTGACATCACTAGTCACAATGGAAATGAA
AACCTCAGGGAAGTTTTAGAATTCTAGCTCTTTAAGATGTCTAGAATAAA
AATTCAGATTGCCACATGTACTCATAAGGATGCAGCAAAACTGTTACTCC
CTTCTATGGGTGGCAGAACATATGATGGTCTTCCTTACAACCTTCCTTTG
CAAAACTAAGAACTGAGTCTGTTGCCTGGAGGTCCTATTGCCCACCCCTG
CAACAGGAAAACAAAACAAAACAAACAAATAAACACAAAAAAAGGAGAAA
AGACTGAAACAAGAGGAAGACATAGTTTTCCTAAGTCTGGAAAATGGAGC
CCGAATTTGTTTCAAATCGGGTGTTCCCCAGTTTTCCAAAGGGAAGGATC
CTAAACGGTCTTTGGGGCAATGGTTGGAAGGAATCCCACTCCCCAGGGTT
CCCCCTGCTGGGAAATTTTCTTGGTCAATTCTTCCCTTCCAACCCCCCGG
GCCTGTGATTTTTTTTTAAAAAACCTGCCAGGGTAAAAGCCAAAATATCC
TTTTATCCCCTACG

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXAGAAATTCCAGAGACTGCTGGTACATAGAGGTCCTGTGTGGG
TCTGCATCAGATGAGGTCCAAGTTCTGAGAGAAGTGGAGAGGTCCCCATT
CATAACCTGAAAGCTGTCTCCAACTGATAACCACTCACAAACAAAAACTT
AGTTCTCTCTAATGGAGTCTCATGGGGGACCCAAAGCACTCTTATAGACC
AGGCCTCATGCTCAGCAGTAGATGGCCAACATAATTTAATGCATCCTTGG
AAGTTCTTTGNCTCANAAGATTTTGTCTCTGTTCATTTTGGCCTATTCTG
ACTTGCCATTTTTGTTTTATCTTATTTTTATTTTGTTCTTTGGGTGCCTG
TTTTCTGTGGAGAGACAAAGGGGTGTGGATGTAGGTAGGATCTAGATGGA
GTTTTCCCCCCCTTCCTTTTTTTCCCTTCCCCTTTTCCCCCCTTTTTCCC
CCTTTCCTCCTTCCCTCCTTCCCCTCCCTCCCCTTTTTCCTTTTTTTTTC
CTTTTTATCCCTTATCCTCTTTTTCCTTACCTTTCTTATTTTATTTTCCC
TTTTTTAACCTACTTTCTCTCCCACACCCCCCCCTTCTCCTTTCTTTTCT
TTTTTTTTTAATATCATTTCCCATCAACCCCCCTCCATTTTCCTCCTCTT
TTCCTCCCCCCCATTTTTTTTCTCCCACTTTTTTACTCTCCCCCCCCN

Query= MSMg01no439_l17.b1 MSMg01no439_l17.b1 CHROMAT_FILE:
MSMg01no439_l17.b1 PHD_FILE: MSMg01no439_l17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:56 2005
         (492 letters)



>mm_chr14_77341901_77342788
          Length = 888

 Score =  901 bits (466), Expect = 0.0
 Identities = 481/488 (98%), Gaps = 4/488 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   ggaattcatagatacttctcaaaaaataaaaagagagacacggttagagctgaggatgta 64
           |||||||||||||||| || |||||||    |||||||||||||||||||||||||||||
Sbjct: 688 ggaattcatagatactccttaaaaaat----agagagacacggttagagctgaggatgta 633

                                                                       
Query: 65  actgggtggtagaatgcttaccttatacgtacaagaccctgtattgggttcccaattcag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 actgggtggtagaatgcttaccttatacgtacaagaccctgtattgggttcccaattcag 573

                                                                       
Query: 125 aaaaataatcattattaaagctgcaccatgggctacatgtgaacaacaggttgactgaca 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 aaaaataatcattattaaagctgcaccatgggctacatgtgaacaacaggttgactgaca 513

                                                                       
Query: 185 tcactagtcacaatggaaatgaaaacctcagggaagttttagaattctagctctttaaga 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tcactagtcacaatggaaatgaaaacctcagggaagttttagaattctagctctttaaga 453

                                                                       
Query: 245 tgtctagaataaaaattcagattgccacatgtactcataaggatgcagcaaaactgttac 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tgtctagaataaaaattcagattgccacatgtactcataaggatgcagcaaaactgttac 393

                                                                       
Query: 305 tcccttctatgggtggcagaacatatgatggtcttccttacaaccttcctttgcaaaact 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tcccttctatgggtggcagaacatatgatggtcttccttacaaccttcctttgcaaaact 333

                                                                       
Query: 365 aagaactgagtctgttgcctggaggtcctattgcccacccctgcaacaggaaaacaaaac 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 aagaactgagtctgttgcctggaggtcctattgcccacccctgcaacaggaaaacaaaac 273

                                                                       
Query: 425 aaaacaaacaaataaacacaaaaaaaggagaaaagactgaaacaagaggaagacatagtt 484
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 272 aaaacaaacaaataaacacaaaaaaaggagaagagactgaaacaagaggaagacatagtt 213

                   
Query: 485 ttcctaag 492
           ||||||||
Sbjct: 212 ttcctaag 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 888
Length adjustment: 10
Effective length of query: 482
Effective length of database: 878
Effective search space:   423196
Effective search space used:   423196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)