Query= MSMg01no439_m07.b1 MSMg01no439_m07.b1 CHROMAT_FILE:
MSMg01no439_m07.b1 PHD_FILE: MSMg01no439_m07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:59 2005
(483 letters)
>mm_chr14_16491182_16492064
Length = 883
Score = 832 bits (430), Expect = 0.0
Identities = 459/476 (96%), Gaps = 13/476 (2%)
Strand = Plus / Plus
Query: 5 gaattcaactctttcactaaagtgaatatatttaaagtcaaatatccaggagagagttca 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaactctttcattaaagtgaatatatttaaagtcaaatatccaggagagagttca 264
Query: 65 tatagagaagggatatctttgaaacaaaaaagagaaagtctgacaatagattagaaatat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tatagagaagggatatctttgaaacaaaaaagagaaagtctgacaatagattagaaatat 324
Query: 125 ttgcaaaaggattagtagttctacctgtaatatccacagcccataagcacacaaagagat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 325 ttgcaaaaggattagtagttctacctgtaatatccacagcccataagcacacaaaaagat 384
Query: 185 gctcaatctcattagcaatcatgaaaagataacctccctattgcctaagttgactcatga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gctcaatctcattagcaatcatgaaaagataacctccctattgcctaagttg-------- 436
Query: 245 tgtaacatttacacatgtgcatacataagtactcacacagaacttaattatgtgttcact 304
|| ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 437 --ta---tttacacatgtgcatacataagtacacacacagaacttaattatgtgttcact 491
Query: 305 aataaatgtgaatttctcagattggaactaaatgataaacacttagagagccactgaatt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 aataaatgtgaatttctcagattggaactaaatgataaacacttagagagccactgaatt 551
Query: 365 tattggggaaactcacagaaatatggataatgggttatttcctggtgattcaaaggcagc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tattggggaaactcacagaaatatggataatgggttatttcctggtgattcaaaggcagc 611
Query: 425 tgcctcaccataaagccctccccagcaaggggaaaaactaatgaaagctggattcc 480
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tgcttcaccataaagccctccccagcaaggggaaaaactaatgaaagctggattcc 667
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 883
Length adjustment: 10
Effective length of query: 473
Effective length of database: 873
Effective search space: 412929
Effective search space used: 412929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no439_m07.g1 MSMg01no439_m07.g1 CHROMAT_FILE:
MSMg01no439_m07.g1 PHD_FILE: MSMg01no439_m07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:59 2005
(444 letters)
>mm_chr14_16624601_16625444
Length = 844
Score = 828 bits (428), Expect = 0.0
Identities = 440/444 (99%)
Strand = Plus / Minus
Query: 1 catatcttgcaattattttacccacactgtatctggaaaggcagtctgggactgcttaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 catatcttgcaattattttacccacactgtatctggaaaggcagtctgggactgcttaca 459
Query: 61 tctgaagactaataaaagataccaagtgttctgatcaagatgtggttcactgcacagtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 tctgaagactaataaaagataccaagtgttctgatcaagatgtggttcactgcacagtct 399
Query: 121 attttcagagccttgatgaaagagacttggccaggcataaggaggagtgagagaaaggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 attttcagagccttgatgaaagagacttggccaggcataaggaggagtgagagaaaggaa 339
Query: 181 tacaaatggagtgaacttggagagacagagggacagagacgaaagacagagatgaagtac 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 338 tacaaatggagtgaacttggagagacagagggacagagacgaaatacagagatgaagtac 279
Query: 241 cccttcttaatgagcactcaggcgatgcttaacctgactttgtaactatggtatatcaag 300
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 cccttcagaatgagcactcaggcgatgcttaacctgactttgtaactatggtatatcaag 219
Query: 301 gaaagacttggattttacttttatatttaatttatatatgtgtctcattaactatgaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 gaaagacttggattttacttttatatttaatttatatatgtgtctcattaactatgaatt 159
Query: 361 gcaatcttagctcttcccttccttgatgtgagctgatgcgcatgtcacataatcgctgta 420
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 158 gcaatcttagctcttcccttccttgatgtgagctgatgtgcatgtcacataatcgctgta 99
Query: 421 tgcctcaacttcctcatttaaatg 444
||||||||||||||||||||||||
Sbjct: 98 tgcctcaacttcctcatttaaatg 75
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space: 361956
Effective search space used: 361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
