NNNTCTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTCCAGAGGATC
CGCGGAATTCCCATAATGAGCCAGAATACTACTGATAGGGAAAACTGCAG
ATGCATTCTAAAGCAATTAGCAGGATACAGAGGAAAGCCATTATGTAAAA
AGACCAAGATATTTATCTTTTGGTTATACTAATTCATGTTTAAAACATTA
GCACATAGACACTTTAGAATGCTCTTGCTTTACTTTTTTATTGAAATTCC
TATCACAAAATATACATATATCTGTAGCTGTTTATGTCATTTACTGTTCT
ATAATGTGCATTTTGGATATTGCTAAGTGAAACAATTTATGTGTTGGACA
AAAGTATAAAGTCTTTGTACATTGTAAGGTGCTTTGATAATGATAATGGC
AAAGCTACTGTGAAGTTGCCATAGTGATGCAAAGCTTCTATTGCTGACTC
ATCACTGAGTCCTTCTCTATCCTTCCACTTCTCTATTAAAGCTTTAGCAC
TCTTGGGAAACTCCCATTGCTACCAGTACAGTTGGTAGAGCTAAAGAGAA
GACAAGCAAAAGAAAAAAAGAAGATGTAATTCACCTGAAACTTTTAAGCA
TGGAAAGACAGCGTGACAGATTAGGATCCCTGGAAGGTGTCGGGTCATTT
TCCTACTCCAGGTTTCCACTTTACTCTTTCATGAAAACTCCATTTCCCTC
CTTCACTCTCTAGGGAATTTAAAAAATCCCTACCGCTTTATTTTTATTTA
TTCC

NAACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTAATACATATCTTTAGTCT
TAAAGAATGATGTCTAATTGAGGGGCAGAGAAAGTGATGAATCAGAGAAA
TATTTGACAGAGTGGGTCAGAGATGCCCAACTCTCAGGAGAAAAGCTATT
TAGGAGCAGTGCAGGGCAGTTGAGTTTCTTCAGTTCAGTTAACTGGAGTT
GAGTTTACTGCAGTAAGTTGCAAGTTAGTTCAGTGAGCCCAAAGCAGTGT
AGTGCAGTTGAGTATAGAAAAACTTCAACAGAGGAATTTCTAAAGGCCAA
GAAACATTCAAAAGAATTATTCAAGTCCTTAATCATCAGAGAAATACAAA
TCAAAACCTCAAGTACAGCACATGCTTGAGAGGATGTGCAGTAAGGAGAA
TGCTCCTAGATTTCTGGTGGAAGTAAAAACTTGCACAACCAGTTTGCAAA
TCAATCTGGTGGTTTATTATAAAATTGGGAATAATTCCACCTCAAAACCA
ATCTATATTACTCCTGGGTATGTACCCAAAAGATACTCCACCATACCTAC
CTCAAGAACTCTTGTTAAACTATGTTCCTAGCAGCTTTATTCATTATAGT
CAGAAACTAGAAATAATCTAGATTTCCCTTAGTAAAAGAACAGATAAAAA
ATATGGTTCATTTACACATGGAATACTACTCAGCTATTAAAACAAGGGCA
TCTTGGG

Query= MSMg01no440_f04.b1 MSMg01no440_f04.b1 CHROMAT_FILE:
MSMg01no440_f04.b1 PHD_FILE: MSMg01no440_f04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:44 2005
         (565 letters)



>mm_chr14_88528594_88529558
          Length = 965

 Score = 1081 bits (559), Expect = 0.0
 Identities = 559/559 (100%)
 Strand = Plus / Plus

                                                                       
Query: 7   gaattcccataatgagccagaatactactgatagggaaaactgcagatgcattctaaagc 66
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcccataatgagccagaatactactgatagggaaaactgcagatgcattctaaagc 266

                                                                       
Query: 67  aattagcaggatacagaggaaagccattatgtaaaaagaccaagatatttatcttttggt 126
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aattagcaggatacagaggaaagccattatgtaaaaagaccaagatatttatcttttggt 326

                                                                       
Query: 127 tatactaattcatgtttaaaacattagcacatagacactttagaatgctcttgctttact 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tatactaattcatgtttaaaacattagcacatagacactttagaatgctcttgctttact 386

                                                                       
Query: 187 tttttattgaaattcctatcacaaaatatacatatatctgtagctgtttatgtcatttac 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tttttattgaaattcctatcacaaaatatacatatatctgtagctgtttatgtcatttac 446

                                                                       
Query: 247 tgttctataatgtgcattttggatattgctaagtgaaacaatttatgtgttggacaaaag 306
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tgttctataatgtgcattttggatattgctaagtgaaacaatttatgtgttggacaaaag 506

                                                                       
Query: 307 tataaagtctttgtacattgtaaggtgctttgataatgataatggcaaagctactgtgaa 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tataaagtctttgtacattgtaaggtgctttgataatgataatggcaaagctactgtgaa 566

                                                                       
Query: 367 gttgccatagtgatgcaaagcttctattgctgactcatcactgagtccttctctatcctt 426
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gttgccatagtgatgcaaagcttctattgctgactcatcactgagtccttctctatcctt 626

                                                                       
Query: 427 ccacttctctattaaagctttagcactcttgggaaactcccattgctaccagtacagttg 486
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ccacttctctattaaagctttagcactcttgggaaactcccattgctaccagtacagttg 686

                                                                       
Query: 487 gtagagctaaagagaagacaagcaaaagaaaaaaagaagatgtaattcacctgaaacttt 546
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 gtagagctaaagagaagacaagcaaaagaaaaaaagaagatgtaattcacctgaaacttt 746

                              
Query: 547 taagcatggaaagacagcg 565
           |||||||||||||||||||
Sbjct: 747 taagcatggaaagacagcg 765


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space:   530025
Effective search space used:   530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)