NAATTAGTCCTCATGTXXXXXXXXXXXXXXXXXXXXXTTCCGAGGATCCG
CGGAATTCAAAATTTTATTACTTTCTCAAAGCATCCTCAGGTGAAACATA
CACTTTTCAGCATAATATATAGGCTTCTAACATCTGGTTCCACATTGCTA
TCAGCCAATAGTGATTTATTTCTTGGTGGTATCAACATGTTTAATAACAT
TCTGTACTAGGTTCATACATTTGTGTCATCACAAAACATCTCTAAAATTG
TTGTACTATTTGTATTGCTATTTACAATTGAGGAAATGGTTTCAGAGCCT
TTCGGGATTTATCCACGATTACTCATCTGATACGCTATATGTTTGGAACA
TAATCAAATGGCTTGGTTCCAGAGCAGCAAATGTTCTTTGCATTTGCTTC
CCATTGGCAGGAGAAAAAAAATGCTAGGAATATATTTCCTCTTCTCCATT
TTTGCAGAGTTATTGCCCAAAATTGGNCTAATGTTTATTTTATGATATAT
GCTAATTATTTTCATACAGGAGTAATTTATCTTTAATAATGTATTGGCTA
TTCCCAAATTCTACCCTACACACAAGGTAAAAAACTAGCAGTAATTCCAA
CCCAAACTACAGCACACCTGTTTTATTTCCTTTTCCCACTTATCTAAATT
AAACATTATTTTGAATCCAATTTTAAAAAGAATTCCGGGTTGACTACCCC
GGAAGCCCTCCCTTCCTGGTTGGCCCGGCAATTTAAGGTCTCTTCCTGAT

TTTCATTTTTCCGCCCATGCCTTGGTGGCCTGCCCGGTTTTCCCCATTTA
GGCGATCTTATACAAGGATTTGCGTAATTCCAGCTACTATTTGTGCTGGC
TCATGTTGATTGCCAACTTGATTGTATTAAGAACCACTAAGTGGATTTCA
TATACACACTTTACTTATGTGTGTAACAGTCCGTGCCCATGACAGGCACT
GACCATAGTAAGACTCATCCTGTATGTATACAGCACTATCCCAAAGGCTG
AGACTCATATTCATAGAACACCCACCTACACCATGTTACCCGGAGCATAC
ATTGATTCCTTTGCTGTCAGACCATCACTCTATTTATTTTCTCTCTCTGC
TATTCCCTCCCTGTTATGCTTTCTCTGATCCCCATGATCCCAATTTACTC
CCTTCTCACCCGTGTTATTTCTGACCTATCTCTGCCGCCCCCCACAGACA
TGTCGATTTTAGTATCACCTACATCTTCTTTCTGTTACACCTTTTTTTCC
CCCCCCCTTTTTTATTTCTCCGTTGTTTGTTTGTCCCATCTTTCTGCTTC
TCTTTTTCCCCGTCTCCCCTTTTTTTTTTCCTCCCCGTGCCCCATTTACC
ATTTTTCCTCCCCCCCTTTATTTTATACGACCTTCCCTTTTTTTCCCTCT
TATCTTTAGCATTTCCCCTTCCCCCTCCTTCCACTTCCCCCGCTCTTACC
ACCCCACTTTTTGCTTCCCTTTATTTCTCGCCTTTCCCTCCACCCCTTTT
CCTCTTTCTC

Query= MSMg01no443_l17.b1 MSMg01no443_l17.b1 CHROMAT_FILE:
MSMg01no443_l17.b1 PHD_FILE: MSMg01no443_l17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:25 2005
         (403 letters)



>mm_chr14_80920754_80921556
          Length = 803

 Score =  733 bits (379), Expect = 0.0
 Identities = 397/403 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttctcaaagcatcctcaggtgaaacatacacttttcagcataatatataggcttctaaca 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 ttctcaaagcatcctcaggtgaaacatacacttttcagcataatatataggcttttaaca 260

                                                                       
Query: 61  tctggttccacattgctatcagccaatagtgatttatttcttggtggtatcaacatgttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctggttccacattgctatcagccaatagtgatttatttcttggtggtatcaacatgttt 320

                                                                       
Query: 121 aataacattctgtactaggttcatacatttgtgtcatcacaaaacatctctaaaattgtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aataacattctgtactaggttcatacatttgtgtcatcacaaaacatctctaaaattgtt 380

                                                                       
Query: 181 gtactatttgtattgctatttacaattgaggaaatggtttcagagcctttcgggatttat 240
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 gtactatttgtattgctatttacaattgaggaaatgggttcagagcctttcgggatttat 440

                                                                       
Query: 241 ccacgattactcatctgatacgctatatgtttggaacataatcaaatggcttggttccag 300
           ||| ||| |||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccatgatcactcatctgagaagctatatgtttggaacataatcaaatggcttggttccag 500

                                                                       
Query: 301 agcagcaaatgttctttgcatttgcttcccattggcaggagaaaaaaaatgctaggaata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agcagcaaatgttctttgcatttgcttcccattggcaggagaaaaaaaatgctaggaata 560

                                                      
Query: 361 tatttcctcttctccatttttgcagagttattgcccaaaattg 403
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatttcctcttctccatttttgcagagttattgcccaaaattg 603


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 403
Length of database: 803
Length adjustment: 9
Effective length of query: 394
Effective length of database: 794
Effective search space:   312836
Effective search space used:   312836
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)