Query= MSMg01no444_c09.b1 MSMg01no444_c09.b1 CHROMAT_FILE:
MSMg01no444_c09.b1 PHD_FILE: MSMg01no444_c09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:58 2005
(545 letters)
>mm_chr14_122733688_122734632
Length = 945
Score = 998 bits (516), Expect = 0.0
Identities = 534/540 (98%), Gaps = 1/540 (0%)
Strand = Plus / Plus
Query: 7 aattcactctaat-tactcctgttgtgctatctcaatcttcttataaccataaatgttac 65
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 aattcactctaatatattcctgttgtgctatctcaatcttcttataaccataaatgttac 265
Query: 66 atgtttgactggtttcagtgtatcttttttaaaaattgctacatttaattaatatgtgta 125
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 atgtttgactggtttcagtgtatcttttttaaaaattgctacatttaattaatatgtgtg 325
Query: 126 tatatgcacatgccatagcacatatgggacagtcagacaactgtaggggtccctctctcc 185
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 326 tatatgcacatgccatagcacatatgggacagtcagacaactgtgggggtccctctctcc 385
Query: 186 ttccctcacgtggggttgaactcacttcatcaggcttagtggcaagtgcctctacccact 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ttccctcacgtggggttgaactcacttcatcaggcttagtggcaagtgcctctacccact 445
Query: 246 gtgctgtcctgccagctatcatagctttttaaattgctgcaagaatttctgttatcttaa 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gtgctgtcctgccagctatcatagctttttaaattgctgcaagaatttctgttatcttaa 505
Query: 306 tagatgaataataaacatcaaatgttttcactttaattaaccatttagttaaccattctc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tagatgaataataaacatcaaatgttttcactttaattaaccatttagttaaccattctc 565
Query: 366 caactattgaggctatgtaagttgtatctggtttttactataattcataacataatgaat 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 caactattgaggctatgtaagttgtatctggtttttactataattcataacataatgaat 625
Query: 426 tttgatacatttcacaataaggaactctgtatatctaattttctgcccaggctggtctaa 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tttgatacatttcacaataaggaactctgtatatctaattttctgcccaggctggtctaa 685
Query: 486 acctcaccgtggagctgaaacagccttggctttcttggcttcctgtttctaacttcccag 545
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 686 acctcaccgtggagctgaaatggccttggctttcttggcttcctgtttctaacttcccag 745
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space: 500225
Effective search space used: 500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no444_c09.g1 MSMg01no444_c09.g1 CHROMAT_FILE:
MSMg01no444_c09.g1 PHD_FILE: MSMg01no444_c09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:58 2005
(273 letters)
>mm_chr14_122891301_122891973
Length = 673
Score = 528 bits (273), Expect = e-154
Identities = 273/273 (100%)
Strand = Plus / Minus
Query: 1 agttgttcctcaaatagccacattttgctaatatattacactgaagataattatacttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 agttgttcctcaaatagccacattttgctaatatattacactgaagataattatacttct 414
Query: 61 gtgatgttttaaatcaatactttgactctataagaatactatcatttttaataactgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gtgatgttttaaatcaatactttgactctataagaatactatcatttttaataactgaaa 354
Query: 121 atttctacatttccctttggtataaacactttaaaacagatagaaatagaatgcccactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 atttctacatttccctttggtataaacactttaaaacagatagaaatagaatgcccactg 294
Query: 181 aaatccttcccagaatgatgaccaatatgaaaaaaccatcacaccaaaactaaaactgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 aaatccttcccagaatgatgaccaatatgaaaaaaccatcacaccaaaactaaaactgag 234
Query: 241 ttagaccagtttcccttctctaagaaaagagag 273
|||||||||||||||||||||||||||||||||
Sbjct: 233 ttagaccagtttcccttctctaagaaaagagag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 673
Length adjustment: 9
Effective length of query: 264
Effective length of database: 664
Effective search space: 175296
Effective search space used: 175296
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
