Query= MSMg01no444_e01.b1 MSMg01no444_e01.b1 CHROMAT_FILE:
MSMg01no444_e01.b1 PHD_FILE: MSMg01no444_e01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:06 2005
(346 letters)
>mm_chr14_37562578_37563323
Length = 746
Score = 545 bits (282), Expect = e-159
Identities = 330/352 (93%), Gaps = 12/352 (3%)
Strand = Plus / Plus
Query: 1 cagctcttggctcagtggtctacctactgtcattctcaccggctcaactctttcctcctc 60
|||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 201 cagctcttggctcagtagtctacctactgtcattctcacaggctcaactctttgctcctc 260
Query: 61 cctataggctttccaagtggctctatgttccttaagtttcctttcctagccgacctaaag 120
| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 cttataggctttccaagtggctctctgttccttaagtttcctttcctagccgacctaaag 320
Query: 121 acccagatttccaggcttcccatttagactgacccggggcttttctcattttaagaaatt 180
|||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 321 acccagatttccaggcttcccatttagactgacccggggcttctctcaacttaagaaatt 380
Query: 181 aactattcatgtaggcctggacacttatttcacctataggatagttataatccac---tt 237
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 aactcttcatgtaggcctggacacttatttcacctataggatagttataatccacaaat- 439
Query: 238 ttttt---atatgcacacacacacaagcatatgcacatgaatgcttacaaatactctctt 294
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 -----cacatatgcacacacacacaagcatatgcacatgaatgcttacaaatactctctt 494
Query: 295 aggcagagatctgtcaatcatccaacagagaacattcaaggggaagtagtga 346
|||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 495 aggcagagatctgtcaattatccaacagagaacattcaaggggaagtagtga 546
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no444_e01.g1 MSMg01no444_e01.g1 CHROMAT_FILE:
MSMg01no444_e01.g1 PHD_FILE: MSMg01no444_e01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:06 2005
(243 letters)
>mm_chr14_37696250_37696892
Length = 643
Score = 460 bits (238), Expect = e-134
Identities = 241/242 (99%)
Strand = Plus / Minus
Query: 1 attccccaacgggtggatttctgttgctttaggttatgggtgctgtgagcctctaaaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 attccccaacgggtggatttctgttgctttaggttatgggtgctgtgagcctctaaaggc 383
Query: 61 catgaaatgcaaggactagttggtactttctgggagaccttgcccagataacaggcaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 catgaaatgcaaggactagttggtactttctgggagaccttgcccagataacaggcaata 323
Query: 121 ctgtaaatttccttctcctaaagtctgggtggcctgtcttactgcccaacagtatgttga 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 322 ctgtaaatttccttctcctaaagtctgggtggcctgtcttactgcccaacagtatgctga 263
Query: 181 ctttacacttaaaactttacttgagctgttggtgatagctcagttgggctgttgatagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ctttacacttaaaactttacttgagctgttggtgatagctcagttgggctgttgatagct 203
Query: 241 ca 242
||
Sbjct: 202 ca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
