Query= MSMg01no444_k11.b1 MSMg01no444_k11.b1 CHROMAT_FILE:
MSMg01no444_k11.b1 PHD_FILE: MSMg01no444_k11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:37 2005
(393 letters)
>mm_chr14_75547896_75548685
Length = 790
Score = 675 bits (349), Expect = 0.0
Identities = 381/393 (96%), Gaps = 3/393 (0%)
Strand = Plus / Minus
Query: 1 gaataatgcatgcatgtgttcactaaagatccttgtgtcactttctttttacagagagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 gaataatgcatgcatgtgttcactaaagatccttgtgtcactttctttttacagagagga 531
Query: 61 ctacaggagataaagtcccaataaacaataatactcagcatcttgttttgttttgttttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 ctacaggagataaagtcccaataaacaataatactcagcatcttgttttgttttgttttt 471
Query: 121 ttaaaaatctacattctgtagtattcatacggatgcaatatctaggtatgctatgtttta 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 470 ttaaaaatctacattctgtagtattcatacggatgcaatgtctaggtatgctacgtttta 411
Query: 181 catcatccgctccttggcagcttgcctcggaaacgctcgtgtaatctaaaattatctatt 240
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 410 catcatccgctccttggcagcttgcctcggaaacgctcatgtaatctaaaattatcaaac 351
Query: 241 gtgttcagcttccttttggctcacagaaaaactagaattgtaagaagttgcaacaggcta 300
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gagctcagcttccttttggctcacagaaaaactagaattgtaagaagttgcaacaggcta 291
Query: 301 gcactaaccacattcccaatccacaaatcagcaggacataataacggcagaagacaatgg 360
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 290 gcactaaccacattcccaatccacaaatcagcgggacataa---cggcagaagacaatgg 234
Query: 361 tgtatccaatctacgtgaccacttaaatgaacc 393
|||||||||||||||||||||||||||||||||
Sbjct: 233 tgtatccaatctacgtgaccacttaaatgaacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 393
Length of database: 790
Length adjustment: 9
Effective length of query: 384
Effective length of database: 781
Effective search space: 299904
Effective search space used: 299904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no444_k11.g1 MSMg01no444_k11.g1 CHROMAT_FILE:
MSMg01no444_k11.g1 PHD_FILE: MSMg01no444_k11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:37 2005
(159 letters)
>mm_chr14_75381813_75382371
Length = 559
Score = 308 bits (159), Expect = 1e-88
Identities = 159/159 (100%)
Strand = Plus / Plus
Query: 1 ctcgcccagctgcaggctgcctccttaatcgtgagaactagctttgtgtattaacccagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcgcccagctgcaggctgcctccttaatcgtgagaactagctttgtgtattaacccagg 260
Query: 61 gatgtgttcttacacaacaccctgattctagcaagcgagtcctacttcattttctatttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatgtgttcttacacaacaccctgattctagcaagcgagtcctacttcattttctatttg 320
Query: 121 cagagaggaatggaaagagagaaagagggagagatgggt 159
|||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagagaggaatggaaagagagaaagagggagagatgggt 359
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 159
Length of database: 559
Length adjustment: 8
Effective length of query: 151
Effective length of database: 551
Effective search space: 83201
Effective search space used: 83201
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
