MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-447D09
Chromosome	14 (Build37)
Map Location	76,796,521 - 76,796,861
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Gm912, Spert, 4930564B18Rik, Cog3, Slc25a30, LOC100043189, Tpt1, LOC100038852, Gtf2f2, LOC668504, Kctd4, 1200011I18Rik, Nufip1, LOC100043752, 2900040C04Rik
Downstream gene	Tsc22d1, 2810032E02Rik, LOC100043753, LOC100043201, 9030625A04Rik, Ccdc122, D230005D02Rik, LOC100043755, LOC676171
Link	Open Mouse BAC browser

Click to get alignment info.

name	Gm912 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380918 MGI:2685758
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 12 Proteins

name	Spert (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67926 MGI:1915176
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930564B18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75272 MGI:1922522
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Cog3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:338337 MGI:2450151
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc25a30 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67554 MGI:1914804
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043189 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043189
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Tpt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22070 MGI:104890
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100038852 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038852
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gtf2f2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68705 MGI:1915955
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668504 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668504
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 36 ESTs, 13 Proteins pseudo : _no_value

name	Kctd4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67516 MGI:1914766
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1200011I18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67467 MGI:1914717
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nufip1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27275 MGI:1351474
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043752 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043752
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 32 mRNAs, 1291 ESTs, 8 Proteins

name	2900040C04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72893 MGI:1920143
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Tsc22d1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21807 MGI:109127
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	2810032E02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72661 MGI:1919911
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 18 ESTs, 4 Proteins

name	LOC100043753 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043753
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	LOC100043201 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043201
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	9030625A04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:210808 MGI:2445077
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccdc122 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108811 MGI:1918358
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D230005D02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239188 MGI:2444896
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043755 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043755
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 1103 ESTs, 9 Proteins

name	LOC676171 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:676171
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein pseudo : _no_value

name	Gm912 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94397261 GeneID:380918 MGI:2685758
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 12 Proteins product : gene model 912, (NCBI) transcript_id : XM_354829.4

name	Spert (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13385951 GeneID:67926 MGI:1915176
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : spermatid associated transcript_id : NM_026457.1

name	4930564B18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94397263 GeneID:75272 MGI:1922522
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 4930564B18 gene transcript_id : XM_127749.4

name	Cog3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119392069 GeneID:338337 MGI:2450151
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : component of oligomeric golgi complex 3 transcript_id : NM_177381.3

name	Slc25a30 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803227 GeneID:67554 MGI:1914804
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 25, member 30 transcript_id : NM_026232.2

name	LOC100043189 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265680 GeneID:100043189
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043189 transcript_id : XM_001479710.1

name	Tpt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:59276013 GeneID:22070 MGI:104890
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tumor protein, translationally-controlled 1 transcript_id : NM_009429.2

name	LOC100038852 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265368 GeneID:100038852
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hypothetical protein LOC100038852 transcript_id : XM_001471928.1

name	Gtf2f2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351202 GeneID:68705 MGI:1915955
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : general transcription factor IIF, polypeptide 2 transcript_id : NM_026816.3

name	Kctd4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50980304 GeneID:67516 MGI:1914766
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium channel tetramerisation domain containing 4 transcript_id : NM_026214.3

name	1200011I18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71043962 GeneID:67467 MGI:1914717
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1200011I18 gene transcript_id : NM_026177.3

name	Nufip1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369325 GeneID:27275 MGI:1351474
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear fragile X mental retardation protein interacting protein 1 transcript_id : NM_013745.3

name	LOC100043752 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265802 GeneID:100043752
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 32 mRNAs, 1291 ESTs, 8 Proteins product : similar to ribosomal protein S2 transcript_id : XM_001480887.1

name	2900040C04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149265804 GeneID:72893 MGI:1920143
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 2900040C04 gene transcript_id : XM_001480889.1

name	Tsc22d1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46559425 GeneID:21807 MGI:109127
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TSC22 domain family, member 1 transcript_id : NM_207652.1

name	Tsc22d1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47777349 GeneID:21807 MGI:109127
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TSC22 domain family, member 1 transcript_id : NM_009366.2

name	2810032E02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149265684 GeneID:72661 MGI:1919911
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 18 ESTs, 4 Proteins product : RIKEN cDNA 2810032E02 gene transcript_id : XM_894566.3

name	LOC100043753 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265806 GeneID:100043753
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100043753 transcript_id : XM_001480898.1

name	9030625A04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367146 GeneID:210808 MGI:2445077
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9030625A04 gene transcript_id : NM_172488.2

name	Ccdc122 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365913 GeneID:108811 MGI:1918358
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 122 transcript_id : NM_175369.3

name	D230005D02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385662 GeneID:239188 MGI:2444896
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D230005D02 gene transcript_id : NM_172813.2

name	LOC100043755 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265808 GeneID:100043755
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 1103 ESTs, 9 Proteins product : similar to ribosomal protein L23a transcript_id : XM_001480900.1

name	Gm912 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94397262 GeneID:380918 MGI:2685758
definition	codon_start : 1 product : hypothetical protein protein_id : XP_354829.4

name	Spert (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385952 CCDS:CCDS27279.1 GeneID:67926 MGI:1915176
definition	GO_component : GO:0016023 - cytoplasmic membrane-bound vesicle [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation note : novel leucine zipper testicular protein product : testis-specific leucine zipper protein nurit protein_id : NP_080733.1

name	4930564B18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20876980 GeneID:75272 MGI:1922522
definition	codon_start : 1 product : hypothetical protein LOC75272 protein_id : XP_127749.1

name	Cog3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119392070 GeneID:338337 MGI:2450151
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005801 - Golgi cis face [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : component of oligomeric golgi complex 2 product : component of oligomeric golgi complex 3 protein_id : NP_796355.2

name	Slc25a30 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385736 CCDS:CCDS27281.1 GeneID:67554 MGI:1914804
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006839 - mitochondrial transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : solute carrier family 25, member 30 protein_id : NP_080508.1

name	LOC100043189 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265681 GeneID:100043189
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479760.1

name	LOC100038852 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265369 GeneID:100038852
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001471978.1

name	Tpt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678437 GeneID:22070 MGI:104890
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005615 - extracellular space [Evidence ISS]; GO:0005771 - multivesicular body [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence IEA]; GO:0005515 - protein binding [Evidence IDA] GO_process : GO:0006916 - anti-apoptosis [Evidence IDA] codon_start : 1 note : fortilin; 21 kDa polypeptide under translational control; snoRNA MBI-161; translationally regulated transcript (21 kDa) product : tumor protein, translationally-controlled 1 protein_id : NP_033455.1

name	Gtf2f2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39930425 GeneID:68705 MGI:1915955
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : general transcription factor IIF, polypeptide 2 protein_id : NP_081092.1

name	Kctd4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50980305 CCDS:CCDS27282.1 GeneID:67516 MGI:1914766
definition	codon_start : 1 product : potassium channel tetramerisation domain containing 4 protein_id : NP_080490.3

name	1200011I18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27754089 CCDS:CCDS27283.1 GeneID:67467 MGI:1914717
definition	codon_start : 1 product : hypothetical protein LOC67467 protein_id : NP_080453.2

name	Nufip1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305335 CCDS:CCDS27284.1 GeneID:27275 MGI:1351474
definition	GO_component : GO:0005830 - cytosolic ribosome (sensu Eukaryota) [Evidence ISS]; GO:0005622 - intracellular [Evidence IEA]; GO:0016363 - nuclear matrix [Evidence ISS]; GO:0005730 - nucleolus [Evidence ISS]; GO:0005634 - nucleus [Evidence IDA]; GO:0005726 - perichromatin fibrils [Evidence ISS]; GO:0048786 - presynaptic active zone [Evidence ISS]; GO:0008023 - transcription elongation factor complex [Evidence ISS] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003723 - RNA binding [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence ISS] codon_start : 1 note : nuclear FMRP interacting protein product : nuclear fragile X mental retardation protein interacting protein protein_id : NP_038773.1

name	LOC100043752 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265803 GeneID:100043752
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480937.1

name	2900040C04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149265805 GeneID:72893 MGI:1920143
definition	codon_start : 1 product : hypothetical protein LOC72893 protein_id : XP_001480939.1

name	Tsc22d1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46559426 CCDS:CCDS27285.1 GeneID:21807 MGI:109127
definition	GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; transforming growth factor beta 1 induced transcript 4 product : transforming growth factor beta 1 induced transcript 4 isoform 1 protein_id : NP_997535.1

name	Tsc22d1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678315 CCDS:CCDS27286.1 GeneID:21807 MGI:109127
definition	GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; transforming growth factor beta 1 induced transcript 4 product : transforming growth factor beta 1 induced transcript 4 isoform 2 protein_id : NP_033392.1

name	2810032E02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149265685 GeneID:72661 MGI:1919911
definition	codon_start : 1 product : hypothetical protein LOC72661 protein_id : XP_899659.3

name	LOC100043753 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265807 GeneID:100043753
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480948.1

name	9030625A04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369672 CCDS:CCDS27287.1 GeneID:210808 MGI:2445077
definition	codon_start : 1 product : hypothetical protein LOC210808 protein_id : NP_766076.1

name	Ccdc122 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425072 CCDS:CCDS27288.1 GeneID:108811 MGI:1918358
definition	codon_start : 1 product : coiled-coil domain containing 122 protein_id : NP_780578.1

name	LOC100043755 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265809 GeneID:100043755
definition	codon_start : 1 product : similar to ribosomal protein L23a protein_id : XP_001480950.1

name	LOC100043201 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043201
definition	number : 1 pseudo : _no_value

name	LOC100043201 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043201
definition	number : 2 pseudo : _no_value

name	LOC100043201 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043201
definition	number : 3 pseudo : _no_value

name	LOC668504 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149265801 GeneID:668504
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 36 ESTs, 13 Proteins product : similar to SVH protein pseudo : _no_value transcript_id : XR_034885.1

name	LOC676171 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149265810 GeneID:676171
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein product : similar to Hmgb1-rs17 protein pseudo : _no_value transcript_id : XR_034899.1

clone name	MSMg01-295B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164H17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-408J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-215I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383P03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-279A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-214E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123N19
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-447D09.T7 (MSMg01no447_d09.b1)	MSMg01-447D09.TJ (MSMg01no447_d09.g1)
ACC	AG535722	AG535723
length	1,311	832
length of high quality (start - end)	---	342 (76 - 417)
definition	CHROMAT_FILE: MSMg01no447_d09.b1 PHD_FILE: MSMg01no447_d09.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:16:01 2005	CHROMAT_FILE: MSMg01no447_d09.g1 PHD_FILE: MSMg01no447_d09.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:16:01 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	NTTTCCTTNNNNNNNNNNCNAATTCTACACACCCACGCTACACCTTACGA GAGTAGGGCCGTGTACAAAGTTACATTCTCGCAATACATTACGACGTACA ATCGAACCATTCACACTATCAACTCATCTCTATGATCTCATCCTCTTGTA GTTCTGTGTATATTTTATGCCGTTCGCTCTGTCCTCTCTATATGCATCTT GTGTCTCATCTTCGGCTCCTCTGCAACTAACAACGAGAACAGCAACCCAC CAAACCCACACCCACGCAGCACACCACATCCGACACCAGTGTCTACTGAG TTATGCGCTCCGCTGCGAGCGCTGAATCTCACCCCNCTAGCGCTCGCCTC CCACGGACGTAGAGCCGACAGAGGTAGTACGAGACATCATACGATCACCG CAAACTGAGAGCGAGTGTGCTATGCTATGCCCAACGGCGTTACAGAAGGA ATGAGGTGTGGTAAACCTGCCCCGCGAGCCGAGCGAACCAGTGCGGGCGC GCGGAGCCGAAGGCGGTATGGCTGCGCTGGCGGCGCGTCCCTCGCCGCTC TCGGAGAGACCGGACCCTGGCTCAGCGTATCGTTTGTCGCGGCCGATAAG GATAATAACGGCCCAGAGACCGAACGCCGATATCCTGATGTCGCGGGAGG GCGCGAGGCGGCCCTCTGTCGGCGAGAGACGGACGCCCTCGCACGTGTTA TCACACGCCAGCTCGCTATGCTGCGCTGCGCCGTATGNCGACGCTCTCGT ATACTTACACCCACACTGAGCGTAGTGTTGGTCGTCAGGGTCGGGAACGT GCACAGCCTGAATACGAACAACACGCTAGCTACACNATACACATGAGTAG CGGCTGAGGTGATCAATCCGAATCATTGACGCCCATACGACCAGCGTCGT CCTCCCGCCAATAGTATACGCGCATGCAGAAGTGCTCCGACCGCACGCTA TCGCGCAAGCACACTACAACTATCGCCGTCGTGCCCTCTGTGATGCTGTT ACCACGTTCCCGCTCTCGCTCGACTCTCGACGGCTGCTTCCTCCGGCCGG ACACACTCACATATAGATGACCGATCAGTCGGACCACAAAATTAAGCGGG TACGAGAGACACTGCAGGGTGATAGATGTATGACGGATAGAGACGGTGAG AGATATCTGTAGTCGAGATAGCGAAGCAAGACCGGACGGCGTGTGAGGCG CGTGTAGAGAGGGGAGAGATAAGGTACGGGCGCTCGACCAGCACATAGTG CACACGCAGTAATGCCCCGCTTCCACACGCAGCTACGCACACACCACCGA CCCTATGACAN	CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXAACTTGACTGTGAATACTTTCCTTA ATTAATTCATATCTGTATTTATGTTGTATGAGTGCCATTATTCATAGGCC TCTAATGAATAGTAGATTCTGATGGGTGCAACCCTATTTTCTCCCATTGT AAATCTCTGGGACATTTATGGGTGGGCATAGTAGGTATTCATTCAGTATT TTCTAAAAGAAGGATCTTAGCCAAGCCTGATGGAGCAGGATATGATGTCA GCTACTTGGGAGACGAATAGTATGTGTATCTCAGTTCAAGGTCTTCCTGG TTCAGCCAACAATGGAGAAGAAAGGGTAAAATGGGGATGGTTGATTCTGT GTCATATATTTTCATTACTACATGTGTGTGTGTGTTGTGTTTTCATTTCT TTTCTTCTTTATTTTTCGCTTATTATTACTCGCCTTTTTTCTCTTCTTTT CTTTTTCTGTAATTTTTTTTCTATCTTCTTTTCTTTCCTTCTCTTTATTT TTATTCTTCTTATTTTCTATCCTCCCCCGAATTTCTTTTCTCTCTTTTTC CTTTATATCTTTCTATTCTTCTTCCACTTAACCTTCTCTTATACTATTCT ATTTCCTTGTTTCCTCCTTCCTTTGTCTCGTATACTCTCCTTTTTTTCAT TTTAAATACAATATCCTATTCCATCCCCCTTTCCTTCCTCCATCCTAGCC CTATCTTCTTCTACTCTCTGCTTCCTTCGATCTTCCATGTCTTTCCCATC ATTTACTCTTTTCCTTCTTACCTTCTATTCAT
quality values	Open. Hide. 0 3 7 7 9 7 7 3 0 0 0 0 0 0 0 0 0 0 3 0 3 7 7 15 8 8 8 8 8 10 10 12 14 22 10 13 10 8 8 8 8 10 9 9 9 9 8 10 10 10 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 10 8 8 8 8 8 8 8 6 6 6 6 8 8 8 8 6 6 8 6 6 8 8 8 8 8 8 6 7 6 6 8 10 10 10 10 10 10 10 8 10 8 8 8 8 8 9 8 6 8 6 6 7 8 8 8 10 10 9 9 9 9 13 10 10 8 8 8 8 8 8 8 12 11 11 11 13 13 16 8 8 8 6 6 6 6 8 8 8 11 11 11 10 12 13 23 26 17 17 28 23 16 16 16 8 8 6 6 8 6 6 8 8 9 9 8 6 6 6 6 6 6 8 8 6 6 8 8 8 8 8 8 8 8 8 6 8 6 7 8 8 8 8 8 8 8 8 6 6 8 6 6 6 6 8 8 8 8 8 8 10 10 10 8 6 8 8 8 10 8 7 7 11 9 9 9 10 10 10 8 10 8 8 8 8 8 8 13 10 10 9 9 8 8 6 6 11 15 13 10 10 8 8 10 6 6 6 8 6 8 8 6 6 6 8 8 8 8 8 8 8 6 6 6 6 8 8 8 8 8 6 6 6 6 8 8 8 8 6 8 6 6 8 8 12 10 10 10 9 9 9 9 9 9 10 10 11 10 8 8 8 11 8 8 8 7 7 8 8 3 0 3 8 10 10 10 10 10 10 11 9 9 10 10 8 8 8 8 8 8 6 6 6 8 8 9 9 11 11 10 8 10 10 8 8 10 10 13 16 11 11 12 12 11 10 10 10 10 10 10 10 10 10 10 8 7 7 7 7 9 9 8 8 8 8 8 8 11 8 8 7 7 8 8 8 8 8 8 10 9 8 8 6 6 8 8 8 8 8 10 12 12 8 6 6 6 6 6 8 8 8 8 8 8 8 8 8 8 6 6 6 6 8 6 6 6 6 8 8 8 8 6 6 6 8 8 10 12 8 8 8 8 8 9 9 6 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 6 8 6 7 8 8 8 8 8 8 6 8 8 8 8 8 6 6 6 6 8 8 7 7 10 8 8 8 10 10 10 8 8 8 8 8 8 8 8 8 8 8 10 10 10 9 11 12 12 11 8 8 8 8 8 8 9 9 10 10 10 10 10 10 10 8 8 8 8 8 10 8 8 8 8 8 8 10 13 8 8 8 6 6 6 8 8 8 8 8 8 7 7 8 8 9 8 6 6 6 8 8 10 8 8 6 6 10 10 10 10 9 8 11 8 8 8 8 8 8 9 10 10 10 10 8 8 6 6 8 8 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 6 6 8 6 8 8 8 8 8 8 8 8 8 8 10 8 8 10 8 8 8 6 6 6 6 6 8 8 8 8 8 8 6 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 9 9 9 8 8 7 7 7 6 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 10 8 8 8 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 9 10 10 3 0 3 11 9 9 9 9 9 8 8 8 8 8 10 10 10 8 8 8 6 6 6 6 8 6 6 6 6 6 8 8 8 10 10 8 8 8 8 8 6 6 6 6 8 8 8 10 8 8 6 6 10 8 9 10 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 6 6 12 11 11 6 6 6 6 8 6 8 8 8 8 8 8 8 9 8 8 8 8 10 10 9 3 0 3 10 6 6 6 10 8 8 8 8 10 11 9 6 6 8 8 8 6 6 8 6 6 6 6 6 6 6 8 6 6 8 6 6 6 8 6 9 6 8 6 6 6 8 10 13 12 8 8 8 8 6 6 6 6 6 6 8 8 8 8 8 8 8 6 6 6 6 7 6 6 7 10 12 10 9 7 7 7 8 8 8 10 10 8 8 10 10 10 10 10 8 6 6 6 6 6 6 6 6 6 8 6 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 9 8 8 8 8 8 8 8 6 6 7 8 8 10 13 10 10 11 16 16 9 9 11 12 13 8 8 8 6 8 6 6 8 7 11 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 7 6 8 10 6 6 7 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 9 9 9 9 9 9 9 8 10 10 8 8 8 8 8 9 9 9 9 9 9 9 10 13 10 10 8 10 10 8 6 8 6 6 6 10 8 9 7 7 6 8 8 8 8 8 8 8 8 6 7 9 7 8 7 8 10 8 8 8 8 8 9 8 10 11 12 11 11 9 9 9 6 8 6 6 6 7 7 8 14 9 9 8 8 8 10 9 9 10 12 9 9 8 8 8 8 8 10 10 10 10 8 8 8 8 8 8 8 8 11 12 11 12 11 9 7 7 7 8 8 8 8 8 8 10 8 8 8 8 10 8 8 9 10 16 16 8 8 7 7 8 8 10 8 8 8 8 8 6 9 7 9 9 10 10 10 13 13 13 8 8 9 8 8 6 6 6 10 10 11 8 8 11 8 10 12 10 6 6 6 6 6 6 6 6 6 8 8 8 8 10 9 10 11 10 12 15 10 9 9 9 9 12 10 8 8 8 6 6 6 6 8 6 9 7 6 6 6 6 6 6 8 8 8 9 8 8 8 8 8 8 8 8 6 8 8 13 10 10 10 10 8 8 8 8 12 8 8 8 8 6 6 8 8 6 6 7 6 6 8 8 8 8 8 8 8 8 8 8 3 0	Open. Hide. 11 11 13 15 12 8 8 8 8 8 9 9 9 23 23 29 29 32 36 39 39 39 39 39 37 32 32 37 37 28 23 13 9 9 6 8 8 6 6 6 18 17 19 24 18 19 30 30 41 47 39 39 47 44 50 50 50 47 27 27 8 8 6 6 7 7 10 9 10 13 17 17 17 21 22 30 33 33 47 59 59 59 59 59 57 57 42 42 47 47 50 47 57 57 57 57 57 68 68 68 68 68 68 68 68 51 47 50 50 50 50 68 68 68 68 68 68 68 68 50 50 50 50 50 47 47 47 57 57 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 50 68 68 68 68 68 68 68 68 68 68 68 51 51 50 50 50 50 57 50 50 50 50 50 50 68 68 68 68 57 57 59 59 59 68 68 59 59 59 59 59 68 68 68 68 68 68 68 68 57 57 57 57 57 59 59 68 68 68 57 57 68 68 57 57 57 57 57 57 57 57 57 68 68 68 57 57 59 59 59 59 57 57 68 57 57 57 59 59 57 57 57 57 57 57 57 59 57 59 57 57 57 68 68 68 68 68 57 48 42 35 28 30 42 44 57 57 57 57 57 57 57 57 59 48 47 47 47 48 48 47 48 54 57 57 57 57 43 43 43 43 43 48 54 54 54 48 48 48 48 48 43 42 42 48 48 48 48 57 59 59 59 59 47 46 46 43 41 41 41 41 30 27 12 11 10 8 8 8 8 8 12 22 34 59 59 47 41 43 43 44 44 43 39 37 37 39 47 59 59 48 48 48 47 43 39 59 32 37 23 28 28 30 30 30 32 32 32 41 32 28 27 21 24 21 27 41 41 46 48 43 44 43 43 44 44 44 43 43 37 37 37 43 44 39 35 29 37 37 37 43 43 42 42 42 42 25 25 12 13 13 28 28 43 43 43 32 32 20 20 15 23 16 17 16 18 18 31 24 17 18 14 14 13 9 11 12 11 12 9 9 12 11 11 11 10 10 12 19 8 8 8 8 8 10 10 8 9 8 8 8 8 8 8 10 10 8 8 8 10 10 10 9 9 8 8 8 8 8 8 9 9 19 15 12 8 9 9 9 10 10 14 15 15 10 8 8 8 10 9 9 13 15 10 10 8 8 11 15 12 13 10 10 10 10 10 9 9 10 12 9 10 12 12 19 18 17 10 10 8 8 8 8 8 11 8 8 6 6 11 8 10 8 8 8 8 10 8 8 8 8 8 9 11 16 16 10 8 8 8 8 8 8 10 13 10 8 8 14 14 10 10 10 10 9 6 11 8 9 10 10 8 8 8 8 8 8 8 8 8 9 9 8 12 8 8 9 10 11 15 13 24 12 15 10 10 10 10 18 8 8 6 6 8 8 8 10 10 11 8 8 8 8 8 8 8 8 8 9 10 10 12 12 14 10 10 11 11 11 12 12 12 10 8 8 7 6 8 8 9 9 10 10 12 11 8 6 6 8 8 8 8 8 9 10 10 9 8 8 8 13 8 8 10 10 10 11 15 10 8 8 8 8 8 8 6 6 6 6 9 10 13 13 6 8 6 9 12 17 30 18 13 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 6 7 8 8 10 10 8 8 10 10 8 12 10 11 10 10 10 10 8 8 8 8 9 11 18 10 11 8 8 8 11 10 6 6 8 8 10 12 8 8 6 6 8 10 6 8 8 8 6 8 8 10 8 9 9 9 9 9 9 9 10 10 8 8 8 8 8 8 10 10 7 6 8 8 6 6 8 15 15 15 12 8 10 8 7 10 7 6 8 12 9 8 9 17 9 11 9 18 18 13 13 9 9 8 6 6 6 8 11 19 14 15 13 12 9 7 8 6 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no447_d09.g1 MSMg01no447_d09.g1 CHROMAT_FILE:
MSMg01no447_d09.g1 PHD_FILE: MSMg01no447_d09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:01 2005
         (342 letters)



>mm_chr14_76796321_76797061
          Length = 741

 Score =  607 bits (314), Expect = e-178
 Identities = 335/342 (97%), Gaps = 1/342 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aacttgactgtgaatactttccttaattaattcatatctgtatttatgttgtatgagtgc 60
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacttgactgtgaatacttttcttaattaattcatatctgtatttatgttgtatgagtgc 260

                                                                       
Query: 61  cattattcataggcctctaatgaatagtagattctgatgggtgcaaccctattttctccc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cattattcataggcctctaatgaatagtagattctgatgggtgcaaccctattttctccc 320

                                                                       
Query: 121 attgtaaatctctgggacatttatgggtgggcatagtaggtattcattcagtattttcta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attgtaaatctctgggacatttatgggtgggcatagtaggtattcattcagtattttcta 380

                                                                       
Query: 181 aaagaaggatcttagccaagcctgatggagcaggatatgatgtcagctacttgggagacg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaagaaggatcttagccaagcctgatggagcaggatatgatgtcagctacttgggagacg 440

                                                                       
Query: 241 aatagtatgtgtatctcagttcaaggtcttcctggttcagccaacaatggagaagaaagg 300
           ||||| | | |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 441 aatagaaggcgtatctcagttcaaggtcttcctggtacagccaacaatggagaagaaagg 500

                                                     
Query: 301 gtaaaatggggatggttgattctgtgtcatatattttcatta 342
           |||||||||  |||||||||||||||||||||||||||||||
Sbjct: 501 gtaaaatggc-atggttgattctgtgtcatatattttcatta 541


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 741
Length adjustment: 9
Effective length of query: 333
Effective length of database: 732
Effective search space:   243756
Effective search space used:   243756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information