Query= MSMg01no449_m07.b1 MSMg01no449_m07.b1 CHROMAT_FILE:
MSMg01no449_m07.b1 PHD_FILE: MSMg01no449_m07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:28 2005
(250 letters)
>mm_chr14_79719112_79719760
Length = 649
Score = 462 bits (239), Expect = e-135
Identities = 245/247 (99%), Gaps = 1/247 (0%)
Strand = Plus / Plus
Query: 1 tcgggcactaataagtcaggaacagagctatttaccgccagaagctcatctaccatcaca 60
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcgggcactag-aagtcaggaacagagctatttaccgccagaagctcatctaccatcaca 259
Query: 61 ggagggctgtgatgagcctggtctctcccacactgcttcctaaggagtgtggtggggacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ggagggctgtgatgagcctggtctctcccacactgcttcctaaggagtgtggtggggacc 319
Query: 121 gaggggacaggacactgaactgtcagcacaggccaactcaacttgtccccttcacggtta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gaggggacaggacactgaactgtcagcacaggccaactcaacttgtccccttcacggtta 379
Query: 181 acctctctcaggaaggagctactagagtgttccaggaaagatcaacaggatttttagcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 acctctctcaggaaggagctactagagtgttccaggaaagatcaacaggatttttagcaa 439
Query: 241 aacaaaa 247
|||||||
Sbjct: 440 aacaaaa 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 649
Length adjustment: 9
Effective length of query: 241
Effective length of database: 640
Effective search space: 154240
Effective search space used: 154240
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no449_m07.g1 MSMg01no449_m07.g1 CHROMAT_FILE:
MSMg01no449_m07.g1 PHD_FILE: MSMg01no449_m07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:28 2005
(249 letters)
>mm_chr14_79897503_79898151
Length = 649
Score = 391 bits (202), Expect = e-113
Identities = 241/264 (91%), Gaps = 18/264 (6%)
Strand = Plus / Minus
Query: 1 tcactaccttctctgcctttgctatcatcatgtctgcaccaccttctagcttctgctcaa 60
|||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 311 tcactaccttctctgcttttgctatcatcatgtctgcactaccttcaagcttctgctcaa 252
Query: 61 gtccatcagaagaacaagtacagaaatacagaagtctttaaaaaacagag---------- 110
||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gtccagcagaagaacaagtacagaaatacagaagtctttaaaaaacagagagagagagaa 192
Query: 111 -aaaaaataaggtcaggtcaaccagggctatcgagcaagaaa-----tgtcacgaaatca 164
|||||||||||||||||||||||||||||||||||||| | ||||| |||||||
Sbjct: 191 aaaaaaataaggtcaggtcaaccagggctatcgagcaag--accccgtgtcaagaaatca 134
Query: 165 aacttttaacagagatcagagctaggccacgggcttagtagcccttccctgtaacccagc 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 aacttttaacagagatcagagctaggccacgggcttagtagcccttccctgtaacccagc 74
Query: 225 actcagaggcggggcacagggatg 248
||||||||||||||||||||||||
Sbjct: 73 actcagaggcggggcacagggatg 50
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
