Query= MSMg01no450_e10.b1 MSMg01no450_e10.b1 CHROMAT_FILE:
MSMg01no450_e10.b1 PHD_FILE: MSMg01no450_e10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:08 2005
(230 letters)
>mm_chr14_101574073_101574701
Length = 629
Score = 406 bits (210), Expect = e-118
Identities = 225/230 (97%), Gaps = 1/230 (0%)
Strand = Plus / Minus
Query: 1 aggagcatggggacaccaatgtccactacaacttatgcctttcacatgcattctgaggat 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 429 aggagcatggggacaccaatgtccactacaacttatgccttt-acatgcattctgaggat 371
Query: 61 ttgaacatggctcctcacacctttacagaaagtgcttttgctcatagacccagctcctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ttgaacatggctcctcacacctttacagaaagtgcttttgctcatagacccagctcctca 311
Query: 121 agacaagttttagcagttcaattactttactctgtgacagtcctgctgtcctcttccaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 310 agacaagttttagcagttcaattactttactctgtgacagtcctgctgtccccaaccaca 251
Query: 181 gtgaaactcatatcactatggtagatactttgtctgatgatgcaaggcat 230
||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 250 gtgaaactcatataactatggtagatactttgtctgatgatgcaaggcat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 230
Length of database: 629
Length adjustment: 9
Effective length of query: 221
Effective length of database: 620
Effective search space: 137020
Effective search space used: 137020
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no450_e10.g1 MSMg01no450_e10.g1 CHROMAT_FILE:
MSMg01no450_e10.g1 PHD_FILE: MSMg01no450_e10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:08 2005
(550 letters)
>mm_chr14_101415344_101416293
Length = 950
Score = 963 bits (498), Expect = 0.0
Identities = 537/554 (96%), Gaps = 8/554 (1%)
Strand = Plus / Plus
Query: 1 acttataataaaatatcttttaccattgcttttatagcaaaaagtactaataatataaat 60
||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 201 acttataataaaatatcttttaccattacttttatagcaaaaagtacaaataatataaat 260
Query: 61 gtacagtaagaaatgattaatgaaccacatttctcgctcttccagaatattatgcaacaa 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 gtacagtaagaaatgattaatgaaccacatctctcgctcttccagaatattatgcaacaa 320
Query: 121 ttaaaatgtaatttgtgaaagagtataatcacacagtaaggtgttgttatataatattaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaaaatgtaatttgtgaaagagtataatcacacagtaaggtgttgttatataatattaa 380
Query: 181 tgagacctacagttttaaagcacacatatactattaaatctcaatttagtcatatttaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgagacctacagttttaaagcacacatatactattaaatctcaatttagtcatatttaat 440
Query: 241 gcttatttt----ctgtaaaattattaataataatcatataagagaaaagtgcattttaa 296
||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctta----aaaactgtaaaattattaataataatcatataagagaaaagtgcattttaa 496
Query: 297 agaatatagttttgtggtaataatttgcaagatttgtgaaattgctggcttctctttatg 356
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 497 agaatatagttttgtggtaataatttgcaagatttgtgaaattgctggtttctctttatg 556
Query: 357 gcttcgacatattccagttttgtacttcacagtaggaagaatctaaccatattctgtaaa 416
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gcttagacatattccagttttgtacttcacagtaggaagaatctaaccatattctgtaaa 616
Query: 417 actgtttcccctgctttgattagatttaggatacttaatcaatttactcacttctggcgc 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 actgtttcccctgctttgattagatttaggatacttaatcaatttactcacttctggcgc 676
Query: 477 catgttatattagttaaatctcagctgagtgcttagtcataacatttcacgctcatgggt 536
||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct: 677 catgttatattagttaaatctcatctgagtgcttactcataacatttcacattcatgggt 736
Query: 537 aaaatattttaagt 550
||||||||||||||
Sbjct: 737 aaaatattttaagt 750
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space: 507600
Effective search space used: 507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
