Query= MSMg01no451_h16.b1 MSMg01no451_h16.b1 CHROMAT_FILE:
MSMg01no451_h16.b1 PHD_FILE: MSMg01no451_h16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:44 2005
(595 letters)
>mm_chr18_86970354_86971348
Length = 995
Score = 1081 bits (559), Expect = 0.0
Identities = 583/591 (98%)
Strand = Plus / Plus
Query: 5 gaattcaatttagcaaattgtctgctatatccagaaaacatgctttcttgtagttatgca 64
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 205 gaattcaacttagcaaattgtctgctatatccagaaaatatgctttcttgtagttatgca 264
Query: 65 ttgcttgtatctctgataatattttcaacttacacttactcaaagatccatgaaccttga 124
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttgcttgtatctctgataatcttttcaacttacacttactcaaagatccatgaaccttga 324
Query: 125 acccctcttatgcaaaaatctctttcagcctctcattgtctgtatcttgaagagttgtag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acccctcttatgcaaaaatctctttcagcctctcattgtctgtatcttgaagagttgtag 384
Query: 185 gttctgtgttgttcacaaaaagaagcttttctagggatttgtgtaattattaatctatgg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gttctgtgttgttcacaaaaagaagcttttctagggatttgtgtaattattaatctatgg 444
Query: 245 ctatgaatagaagtcaccaggagtcactttaatacaatccaattatcagagtaatagtag 304
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 445 ctatgaatagaagtcaccaggagtcactttaatacaacccaattatcagagtaatagtaa 504
Query: 305 tattctatcccttaatgcctatgacccataggttgtaggttcttggcccagataatggtg 364
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 505 tattctatcccttaatgcctatgacccataggttgtaggttcttggcctggataatggtg 564
Query: 365 tcaatatggtgttcaacttgtggatcagtccttaactccaagcatacattggttatttac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcaatatggtgttcaacttgtggatcagtccttaactccaagcatacattggttatttac 624
Query: 425 tcccatgatattttaccactactgtactgtactcactatagtgagaccattttgttagaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tcccatgatattttaccactactgtactgtactcactatagtgagaccattttgttagaa 684
Query: 485 tggtctttgttgaagctcacagggttcagaggaaggcaacactggtgatgtatatttttc 544
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 685 tggtctttgttgaagctcacagggttcagaggaaggcaacactggcgatgtatatttttc 744
Query: 545 cccagtatcatgtatagaaccttctattactagaaaagttggtcaataggg 595
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cccagtatcatgtatagaaccttctattactagaaaagttggtcaataggg 795
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space: 576225
Effective search space used: 576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no451_h16.g1 MSMg01no451_h16.g1 CHROMAT_FILE:
MSMg01no451_h16.g1 PHD_FILE: MSMg01no451_h16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:44 2005
(629 letters)
>mm_chr14_109045099_109046127
Length = 1029
Score = 197 bits (102), Expect = 2e-54
Identities = 159/178 (89%), Gaps = 2/178 (1%)
Strand = Plus / Minus
Query: 264 gcctgataagagagacctgtgctgagaaatggaaaccta-acctattggctgccagaatg 322
||||||||||||||||||||||||||||||||||||| | || | |||||||||| |||
Sbjct: 572 gcctgataagagagacctgtgctgagaaatggaaacccatgcc-actggctgccagcatg 514
Query: 323 aagtgatttatgttatcagtcacatctagggattaggcttgttgtttttgcctttataag 382
| || |||||||| |||||| ||||||||||||| ||||| | |||||||| |||||||
Sbjct: 513 aggttatttatgtcatcagttacatctagggattgggcttatggtttttgcatttataaa 454
Query: 383 cctgctgctttgcaataaagttgagccttgatcagaactttgtcttggctccattctt 440
| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 453 cttgctgctttgcaatgaagttgagccttgatcagaactttgtctttcctccattctt 396
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
