Query= MSMg01no452_j05.b1 MSMg01no452_j05.b1 CHROMAT_FILE:
MSMg01no452_j05.b1 PHD_FILE: MSMg01no452_j05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:10 2005
(647 letters)
>mm_chr14_25618970_25620017
Length = 1048
Score = 1123 bits (581), Expect = 0.0
Identities = 629/645 (97%), Gaps = 2/645 (0%)
Strand = Plus / Plus
Query: 5 gaattctctcttgtactcttcaatgctactgtagatggaaggtgagtagcctgattgggt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctctcttgtactcttcaatgctactgtagatggaaggtgagtagcctgattgggt 263
Query: 65 tccaattaaacacaatacagagcttgaactatgaggttccagatgtcaggagatgctctt 124
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tccaatcaaacacaatacagagcttgaactatgaggttccagatgtcaggagatgctctt 323
Query: 125 gctgcctccactgtaattcaaaggctatacaaaacaagtactggggcagatctggccagc 184
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 324 actgcctccactgtaactcaaaggctatacaaaacaagtattggggcagatctggccatc 383
Query: 185 tgctggtgatttgcacgtccttgtattagagcatctttaaggttgactcatcttgaattt 244
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgctggtgatttgcatgtccttggattagagcatctttaaggttgactcatcttgaattt 443
Query: 245 cctacatccacagtgacagatgatgtcagaggtgggtgtttgggggagctaaaaaaaaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cctacatccacagtgacagatgatgtcagaggtgggtgtttgggggagctaaaaaaaaaa 503
Query: 305 aaaaa-gaaagaaaagaaaagaaaaaagaaaaccagtcatgagcgttagaacctccctga 363
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaaaaagaaagaaaagaaaagaaaaaagaaaaccagtcatgagcgttagaacctccctga 563
Query: 364 agttgtagctcacctgggtgttcattgactgaggttgagctggtaaatcctgggagtaaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agttgtagctcacctgggtgttcattgactgaggttgagctggtaaatcctgggagtaaa 623
Query: 424 atctgagatggcaactgataggcctttgagtataggcttgccccccccc-cccaagtctg 482
||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||
Sbjct: 624 atctgagatggcaactgataggcctttgactataggcttgccccccccctccccagtctg 683
Query: 483 ataacgtaacaggcagctggcatctaagattctctcaccagacagcctcctcttttctct 542
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 684 ataacgtaacaggcagctggcatctaagattctctcaccaggcagcctcctcttttctct 743
Query: 543 cgagctatttggaccactggactttgctcacacttcccgagtacaaggctgatgctcagt 602
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 744 cgagctatttggaccactggactttgctcacacttcccgagtacaaggttgatgctcagc 803
Query: 603 tactacttgactcctgcactacaatgcttcctctctatccttggc 647
||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 804 tactacttgactcctgcactacagtgcttcctctctatccatggc 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1048
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1038
Effective search space: 661206
Effective search space used: 661206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no452_j05.g1 MSMg01no452_j05.g1 CHROMAT_FILE:
MSMg01no452_j05.g1 PHD_FILE: MSMg01no452_j05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:10 2005
(278 letters)
>mm_chr14_25798092_25798769
Length = 678
Score = 520 bits (269), Expect = e-152
Identities = 272/273 (99%)
Strand = Plus / Minus
Query: 1 atctgcaaatgaatacgtgagctgtgtggctttgaccaagaaacctaacctctctgggcc 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 atctgcaaatgaatatgtgagctgtgtggctttgaccaagaaacctaacctctctgggcc 432
Query: 61 tcatttataaatgagtaagattatatctccctacaaatctcttcttggagaattccttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tcatttataaatgagtaagattatatctccctacaaatctcttcttggagaattccttct 372
Query: 121 caaaaccagacactgcagctctgtatacagtaggaggtcaccagcagaaagctgggtgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 caaaaccagacactgcagctctgtatacagtaggaggtcaccagcagaaagctgggtgta 312
Query: 181 ggtgcagctctgtatacagtaggaggttaccagcagagagctggagtgtgtgtgtgtgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ggtgcagctctgtatacagtaggaggttaccagcagagagctggagtgtgtgtgtgtgtg 252
Query: 241 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 273
|||||||||||||||||||||||||||||||||
Sbjct: 251 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 219
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 58
Number of extensions: 21
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's gapped: 20
Number of HSP's successfully gapped: 1
Length of query: 278
Length of database: 678
Length adjustment: 9
Effective length of query: 269
Effective length of database: 669
Effective search space: 179961
Effective search space used: 179961
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
