Query= MSMg01no455_d02.b1 MSMg01no455_d02.b1 CHROMAT_FILE:
MSMg01no455_d02.b1 PHD_FILE: MSMg01no455_d02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:38 2005
(637 letters)
>mm_chr14_108636230_108637266
Length = 1037
Score = 1193 bits (617), Expect = 0.0
Identities = 632/637 (99%)
Strand = Plus / Plus
Query: 1 aaaaaattacaaattaataattccaaaaaataagacattaattttactacatcctaaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaaaattacaaattaataattccaaaaaataagacattaattttactacatcctaaagt 260
Query: 61 acagtgatctgcatcaaaagctatgtgacagatctaagaaacaaaatgtcatctttatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acagtgatctgcatcaaaagctatgtgacagatctaagaaacaaaatgtcatctttatca 320
Query: 121 gattgtgcagagtgatctctcaaggtgccataatatactttgctatactgagattattgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gattgtgcagagtgatctctcaaggtgccataatatactttgctatactgagattattgc 380
Query: 181 tttcacagccacttgctcatatcacactatagactaaaatgttaattggaaggatagtag 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 381 tttcacagccacttgctcatatcacactataaactaaaatgttaattggaaggatagtag 440
Query: 241 aaaaatatttaaaaggccttcaatacatacattactaaaatacatgtgtcatttctaatg 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaaataaacaaaaggccttcaatacatacattactaaaatacatgtgtcatttctaatg 500
Query: 301 acccacacacggatgatttaaaagacaaaggatgcaatcctaatgtctagaatgatcttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acccacacacggatgatttaaaagacaaaggatgcaatcctaatgtctagaatgatcttg 560
Query: 361 gacacttgcttctgaacataaagacttggaaaaaacatatgatttctgaataaagatgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gacacttgcttctgaacataaagacttggaaaaaacatatgatttctgaataaagatgat 620
Query: 421 atgttttttagtcctcaatttcagaagaatttctgatgtcctgtggtcatcaaaattaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgttttttagtcctcaatttcagaagaatttctgatgtcctgtggtcatcaaaattaaa 680
Query: 481 gaagatattagctttatgattttcctgctcatccaaaattgaatgatagtcagagattaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaagatattagctttatgattttcctgctcatccaaaattgaatgatagtcagagattaa 740
Query: 541 atgtccacagtacttcttcctatttggaatggacagaacttcatagtttggaaatttaga 600
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atgtccacagtacttctttctatttggaatggacagaacttcatagtttggaaatttaga 800
Query: 601 catttaatctaacaacttgaaagtaactgttctatta 637
|||||||||||||||||||||||||||||||||||||
Sbjct: 801 catttaatctaacaacttgaaagtaactgttctatta 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no455_d02.g1 MSMg01no455_d02.g1 CHROMAT_FILE:
MSMg01no455_d02.g1 PHD_FILE: MSMg01no455_d02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:38 2005
(621 letters)
>mm_chr14_108827925_108828945
Length = 1021
Score = 926 bits (479), Expect = 0.0
Identities = 521/545 (95%), Gaps = 21/545 (3%)
Strand = Plus / Minus
Query: 78 actaataactaaatgatagtaccaggagaaaggaagtgtga-tttttttctgtttcttta 136
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1021 actaataactaaatgatagtaccaggagaaaggaagtgtgattttttttctgtttcttta 962
Query: 137 cactgacacacacagacagacacacagacacacacacagacacacacacacacagacaca 196
||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 961 cactgacacacacagacagacacacag----acacacag--------acacacagacaca 914
Query: 197 gacacacacacacacagacacacaggtgcagacacacacgctcacagacacacagacaca 256
|||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 913 gacacacagacacacagacacacaggtgcagacacacacgctcacagacac----acaca 858
Query: 257 cagacacacagacacacacacacacacacacacacacacattatgctagttggttaactt 316
| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 c--acacac--acacacacacacacacacacacacacacattatgctagttggttaactt 802
Query: 317 cctgtgatttgctgtgatccaaaagctacttaagttaaatgaagagagtaaatattgctg 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 cctgtgatttgctgtgatccaaaagctacttaagttaaatgaagagagtaaatattgctg 742
Query: 377 ttataagagcaatttatttatttcatttttctatgttactttttaaatgagtgatctcat 436
||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 741 ttataagagtaatttatttatttcatttttctatgtttctttttaaatgagtgatctcat 682
Query: 437 agattgaattgcctcaactcacacatttaaaacatgaattcatatattatgcaggaagta 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agattgaattgcctcaactcacacatttaaaacatgaattcatatattatgcaggaagta 622
Query: 497 cttgatttacatgcagtatagtcacacatgcacaggtaacttcctatagttaaattatgg 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cttgatttacatgcagtatagtcacacatgcacaggtaacttcctatagttaaattatgg 562
Query: 557 aaacagaaatgtcaagggctgcagctctgatgaaacatatgggtatgtttccttgcagtg 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaacagaaatgtcaagggctgcagctctgatgaaacatatgggtatgtttccttgcagtg 502
Query: 617 atttt 621
|||||
Sbjct: 501 atttt 497
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 84
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space: 617721
Effective search space used: 617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
