Query= MSMg01no457_l12.b1 MSMg01no457_l12.b1 CHROMAT_FILE:
MSMg01no457_l12.b1 PHD_FILE: MSMg01no457_l12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:02 2005
(245 letters)
>mm_chr14_83213197_83213841
Length = 645
Score = 474 bits (245), Expect = e-138
Identities = 245/245 (100%)
Strand = Plus / Plus
Query: 1 gtccctgggagctctggaggtctggttggtggatattgttgttcttcctgtgtaaacccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtccctgggagctctggaggtctggttggtggatattgttgttcttcctgtgtaaacccc 260
Query: 61 tatctgggctgatgatgtaattagagagaatgattcgtttattttaaatgatttttatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatctgggctgatgatgtaattagagagaatgattcgtttattttaaatgatttttatat 320
Query: 121 attgtcatcactacaaaaatctcaagtaatccctcaacactgttggaataacctgctgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attgtcatcactacaaaaatctcaagtaatccctcaacactgttggaataacctgctgcc 380
Query: 181 tttcatttggttctgtaattcaatgaatctctatatcaatttgtgcacctttgttttttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttcatttggttctgtaattcaatgaatctctatatcaatttgtgcacctttgttttttt 440
Query: 241 cacct 245
|||||
Sbjct: 441 cacct 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no457_l12.g1 MSMg01no457_l12.g1 CHROMAT_FILE:
MSMg01no457_l12.g1 PHD_FILE: MSMg01no457_l12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:02 2005
(442 letters)
>mm_chr14_83385515_83386350
Length = 836
Score = 801 bits (414), Expect = 0.0
Identities = 433/442 (97%), Gaps = 6/442 (1%)
Strand = Plus / Minus
Query: 1 caatatgagaatcttgtataccttcctgctatcttctcaataattgaagtgttgtatgcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 caatatgagaatcttgtataccttcctgctatcttctcaataattgaagtgttgtatgcg 577
Query: 61 gcttacgaactttttcaacagaattctgtgatccatttgtactgtgaaggtgaatgtttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gcttacgaactttttcaacagaattctgtgatccatttgtactgtgaaggtgaatgtttg 517
Query: 121 aaggttttctatttttttaaggatttattgtatctttttgtgacaaaaaaagaagcacaa 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 aaggttttcta-ttttttaaggatttattgtatctttttgtgacaaaaaaagaagcacaa 458
Query: 181 ttaatccatattaattatagcctatcacatatgctataaacatagttatacctccctata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 ttaatccatattaattatagcctatcacatatgctataaacatagttatacctccctata 398
Query: 241 attttattgtattaaatacatgtgaatatggttgttatgtatagacatatatatgcactt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 attttattgtattaaatacatgtgaatatggttgttatgtatagacatatatatgcactt 338
Query: 301 tataaacaggaatatttcattatgcatttactgtcacattccttttatactatgacttgg 360
|||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 337 tataaacaagaatatttcattatgcatttactgtcacattccttttataccatg-----g 283
Query: 361 ttactattgggaagttccctgaaattcataacatgcacttacacattctttttccagttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 282 ttactattgggaagttccctgaaattcataacatgcacttacacattctttttcctgttt 223
Query: 421 tctttcttcctcactctgcttt 442
||||||||||||||||||||||
Sbjct: 222 tctttcttcctcactctgcttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 836
Length adjustment: 9
Effective length of query: 433
Effective length of database: 827
Effective search space: 358091
Effective search space used: 358091
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
