Query= MSMg01no457_p16.b1 MSMg01no457_p16.b1 CHROMAT_FILE:
MSMg01no457_p16.b1 PHD_FILE: MSMg01no457_p16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:25 2005
(548 letters)
>mm_chr14_111126547_111127493
Length = 947
Score = 969 bits (501), Expect = 0.0
Identities = 534/546 (97%), Gaps = 5/546 (0%)
Strand = Plus / Minus
Query: 5 gaattcttctcttgt-c-aggaggttcagagattttcaaatataaatttaaaaactatga 62
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 gaattcttctcttgtactaggaggttcagagattttcaaatataaatttaaaaactatga 688
Query: 63 ttgaaagtgaaaatataatttcactttaagtattatcacaaaaattttaagtcatctgtt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ttgaaagtgaaaatataatttcactttaagtattatcacaaaaattttaagtcatctgtt 628
Query: 123 ttgctaaaagccatctatctttcattattttcacaatagcatcattatattaagtcaatc 182
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tcgctaaaagccatctatctttcattattttcacaatagcatcattatattaagtcaatc 568
Query: 183 cattttctcagttttaatttcggttcatcttatcatattaaaaacaaacacaaaagtctt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 cattttctcagttttaatttcggttcatcttatcatattaaaaacaaacacaaaagtctt 508
Query: 243 aactggttataacatgcccattcacttttgtatgacgtcctcttaatgttttagctagaa 302
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 507 aactggttataacatgcccattcacttttgtatgacgtcctctcaatgttttagctagaa 448
Query: 303 tgatgcttaaaaataacagacatggaatgaaaataatattaaacttgttgtgtattattt 362
|||||||||||||||| |||||||||||||||||||||||||||||| |||| |||| |
Sbjct: 447 tgatgcttaaaaataaaagacatggaatgaaaataatattaaacttg-tgtg--ttatct 391
Query: 363 tacaaacatttacaaactaattgttatttaatatctatgtgactatgtgcttctgctatg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tacaaacatttacaaactaattgttatttaatatctatgtgactatgtgcttctgctatg 331
Query: 423 tatgatatgggagactgcatacatgtgtcttaatacacatgtggacattaaaacacaatt 482
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tatgatataggagactgcatacatgtgtcttaatacacatgtggacattaaaacacaatt 271
Query: 483 ccagtagatcatcgctttccattttatttgtacagnttcttgttcttgtgactctgaatg 542
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 270 ccagtagatcatcgctttccattttatttgtacagtttcttgtttttgtgactctgaatg 211
Query: 543 aaggct 548
||||||
Sbjct: 210 aaggct 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 947
Length adjustment: 10
Effective length of query: 538
Effective length of database: 937
Effective search space: 504106
Effective search space used: 504106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_p16.g1 MSMg01no457_p16.g1 CHROMAT_FILE:
MSMg01no457_p16.g1 PHD_FILE: MSMg01no457_p16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:25 2005
(302 letters)
>mm_chr14_111103001_111103705
Length = 705
Score = 559 bits (289), Expect = e-164
Identities = 300/305 (98%), Gaps = 3/305 (0%)
Strand = Plus / Plus
Query: 1 ataaaatatctcaaaagt---aaaaaaaaaaattacatatagaacagaagccaacattaa 57
|||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 ataaaatatctccaaagtaaaaaaaaaaaaaattacataaagaacagaagccaacattaa 260
Query: 58 ataagctcatctgctttattcactcatctgttcactctgagtgaggtggtgacacatcac 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataagctcatctgctttattcactcatctgttcactctgagtgaggtggtgacacatcac 320
Query: 118 aaaactatggcaataaggcaggagaagcaagtactaacaattatcctggagaatgtgttg 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaactatggcaataaggcaggagaagcaagtactaacaattatcctggagaatgtgttg 380
Query: 178 agattgtagccaatatgaaacaaatacctagactttgtcttaaaagaatactcaaaatac 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agattgtagccaatatgaaacaaatacctagactttgtcttaaaagaatactcaaaatac 440
Query: 238 agaaatatttttaaaaaactcctaggaacacatactggaatgacatattctatgaaaatc 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaaatatttttaaaaaactcctaggaacacatactggaatgacatattctatgaaaatc 500
Query: 298 ttttc 302
|||||
Sbjct: 501 ttttc 505
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 705
Length adjustment: 9
Effective length of query: 293
Effective length of database: 696
Effective search space: 203928
Effective search space used: 203928
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|