Query= MSMg01no458_e05.b1 MSMg01no458_e05.b1 CHROMAT_FILE:
MSMg01no458_e05.b1 PHD_FILE: MSMg01no458_e05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:48 2005
(238 letters)
>mm_chr14_25111659_25112296
Length = 638
Score = 410 bits (212), Expect = e-119
Identities = 230/236 (97%)
Strand = Plus / Minus
Query: 1 gaactgttagcaaagaaaactgaaatagtggtgcctccaacagaaaagcccttgggccca 60
||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 436 gaactgttagcaaaggaaactgaaatagtggtgccaccaagagaaaagcccttgggccca 377
Query: 61 gtgtggtgctttccccctctgcaccaaagataccaaatcaagactggttacaggcctagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gtgtggtgctttccccctctgcaccaaagataccaaatcaagactggttacaggcctagg 317
Query: 121 ttagctcctctttgtaatcctagctcttgtgagtagaagcaggttcacctattttgaacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 316 ttagctcctctttgtaatcctagctcttgtgagtagaagcaggttcacctaagctgaacg 257
Query: 181 taaacctgcaaagccgggttgtggacagcttggaacacatgagaatgtgtctcaaa 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 taaacctgcaaagccgggttgtggacagcttggaacacatgagaatgtgtctcaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no458_e05.g1 MSMg01no458_e05.g1 CHROMAT_FILE:
MSMg01no458_e05.g1 PHD_FILE: MSMg01no458_e05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:48 2005
(127 letters)
>mm_chr14_24920918_24921446
Length = 529
Score = 238 bits (123), Expect = 1e-67
Identities = 127/129 (98%), Gaps = 2/129 (1%)
Strand = Plus / Plus
Query: 1 gagcctctctcccctgggacagagtggggtcagtatgtggccctaaagcatcactttagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gagcctctctcccctgggacagagtggggtcagtatgtggccctaaagcatcactttagg 260
Query: 61 aatttatttggggttatttttttaattagtacacacaccacacacacacaca--tttcat 118
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 aatttatttggggttatttttttaattagtacacacaccacacacacacacacatttcat 320
Query: 119 tatgacatt 127
|||||||||
Sbjct: 321 tatgacatt 329
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 127
Length of database: 529
Length adjustment: 8
Effective length of query: 119
Effective length of database: 521
Effective search space: 61999
Effective search space used: 61999
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
