Query= MSMg01no458_e10.b1 MSMg01no458_e10.b1 CHROMAT_FILE:
MSMg01no458_e10.b1 PHD_FILE: MSMg01no458_e10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:49 2005
(245 letters)
>mm_chr14_72675104_72675748
Length = 645
Score = 373 bits (193), Expect = e-108
Identities = 225/243 (92%), Gaps = 13/243 (5%)
Strand = Plus / Plus
Query: 1 atatcttggttaattaaagaaaactcaaacaaacaaaagcaaaacacaaaactgaaaaca 60
|||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 214 atatcttgtttaaaaaaagaaaactcaaacaaacaaaagcaaaa-acaaaactgaaaaca 272
Query: 61 aaacaaagaaacaaataagcaacaacaacaataaaacaaaaacaaaaacaaaaacaaaac 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 aaacaaagaaacaaataagcaacaacaacaataaaacaaaaacaaaaacaaaa------- 325
Query: 121 aaaacaaaaaagcaaagaatttcaatacccaagcttgggaatataacaagaagccactaa 180
|||||||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 326 -----aaaaaagcaaagaatttcaatagccaagcttgggaatataataagaagccactaa 380
Query: 181 gaattccagagagcaagacttaggaaattagctcaatgataaagtaaagccttagtaagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaattccagagagcaagacttaggaaattagctcaatgataaagtaaagccttagtaagc 440
Query: 241 cta 243
|||
Sbjct: 441 cta 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no458_e10.g1 MSMg01no458_e10.g1 CHROMAT_FILE:
MSMg01no458_e10.g1 PHD_FILE: MSMg01no458_e10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:49 2005
(179 letters)
>mm_chr14_72895382_72895960
Length = 579
Score = 346 bits (179), Expect = e-100
Identities = 179/179 (100%)
Strand = Plus / Minus
Query: 1 aacaagcccagcatcccgcacgttctctggttcagcctttccttgctgctaccccagcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aacaagcccagcatcccgcacgttctctggttcagcctttccttgctgctaccccagcat 320
Query: 61 gcctcagccttggttctgggtgccccagcttccactgcttgtaaccatcagcacaggtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gcctcagccttggttctgggtgccccagcttccactgcttgtaaccatcagcacaggtga 260
Query: 121 gtcaaagataaggttagaggatctcctgtctgcacatctggacttatgtgcaggggaga 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gtcaaagataaggttagaggatctcctgtctgcacatctggacttatgtgcaggggaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 179
Length of database: 579
Length adjustment: 8
Effective length of query: 171
Effective length of database: 571
Effective search space: 97641
Effective search space used: 97641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
