Query= MSMg01no458_e20.b1 MSMg01no458_e20.b1 CHROMAT_FILE:
MSMg01no458_e20.b1 PHD_FILE: MSMg01no458_e20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:51 2005
(290 letters)
>mm_chr14_21882839_21883527
Length = 689
Score = 319 bits (165), Expect = 1e-91
Identities = 195/209 (93%), Gaps = 11/209 (5%)
Strand = Plus / Plus
Query: 1 attcctggtttgttctgaaactaatgagctgttgactgcatttgtccatagagaaaattc 60
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 attcctggtttgttttgaaactaatgagctgttgactgcatttgtccatagagaaa-ttc 259
Query: 61 cctccacatatacctgcatcccttatatagacagtaactttattaaggcccagtggttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cctccacatatacctgcatcccttatatagacagtaactttattaaggcccagtggttat 319
Query: 121 tgttttctttgtttcttccttccttcctttcttccttcctt-cctttctttctttctttc 179
||||||||||||||||| | |||||||||||||| |||| ||||||||| |||
Sbjct: 320 tgttttctttgtttctt--tg------tttcttccttcctttcctt-ctttctttccttc 370
Query: 180 tttctttctttctttctttctttctttct 208
|||||||||||||||||||||||||||||
Sbjct: 371 tttctttctttctttctttctttctttct 399
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 65
Number of extensions: 27
Number of successful extensions: 27
Number of sequences better than 10.0: 1
Number of HSP's gapped: 23
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 689
Length adjustment: 9
Effective length of query: 281
Effective length of database: 680
Effective search space: 191080
Effective search space used: 191080
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no458_e20.g1 MSMg01no458_e20.g1 CHROMAT_FILE:
MSMg01no458_e20.g1 PHD_FILE: MSMg01no458_e20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:51 2005
(428 letters)
>mm_chr14_22082260_22083088
Length = 829
Score = 772 bits (399), Expect = 0.0
Identities = 420/427 (98%), Gaps = 1/427 (0%)
Strand = Plus / Minus
Query: 1 tggagtgggctccatggcaatcatgaagggaatttaaatataaaagcatattttgctaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tggagtgggctccatggcaatcatgaagggaatttaaatataaaagcatattttgctaag 450
Query: 61 ttatatg-tgtaaaggttactccaggactaaggggatagctcagtgataaaacaagcacc 119
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ttatatgttgtaaaggttactccaggactaaggggatagctcagtgataaaacaagcacc 390
Query: 120 tacgcaaacaacaaatatgggcatgattcccagcaccacaaaacaaagggaccaacgacc 179
|| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 taagcaaacaacaaacatgggcatgattcccagcaccacaaaacaaagggaccaacgacc 330
Query: 180 aaaacgatgattctagctgctccaaagaaaatggtgcaaggagggtaaaaagtgaaacta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 aaaacgatgattctagctgctccaaagaaaatggtgcaaggagggtaaaaagtgaaacta 270
Query: 240 aggagaacagttaatagtgaggaaacagatgaatgcaacagagtaactgctggcaaagaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aggagaacagttaatagtgaggaaacagatgaatgcaacagagtaactgctggcaaagaa 210
Query: 300 aaacaagtaaggtgcatgtgtagcagaggatggcgtagtcggccattgatgggaggagag 359
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 209 aaacaagtaaggtgcatgtgtagcagaggatggcatagtcagccattgatgggaggagag 150
Query: 360 gcccttggtcttgtgaagagcatataccccagtacaggaagcgggagtgagtgggttggg 419
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 149 gcccttggtcttgcgaagagcatataccccagtacaggaagcgggagtgggtgggttggg 90
Query: 420 gagaagg 426
|||||||
Sbjct: 89 gagaagg 83
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 829
Length adjustment: 9
Effective length of query: 419
Effective length of database: 820
Effective search space: 343580
Effective search space used: 343580
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
