Query= MSMg01no458_j22.b1 MSMg01no458_j22.b1 CHROMAT_FILE:
MSMg01no458_j22.b1 PHD_FILE: MSMg01no458_j22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:16 2005
(447 letters)
>mm_chr14_15787331_15788174
Length = 844
Score = 764 bits (395), Expect = 0.0
Identities = 433/447 (96%), Gaps = 3/447 (0%)
Strand = Plus / Minus
Query: 1 tactcttcctctgcagcaactgacacttgttactatgaacatgtcagtatctaagatatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 tactcttcctctgcagcaactgacacttgttactatgaacatgtcagtatctaagatatc 585
Query: 61 attgcaaatacttaatgcagaagtgataccttccaccatggagcccatttaacccatatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 attgcaaatacttaatgcagaagtgataccttccaccatggagcccatttaacccatatc 525
Query: 121 aagaagtaaatctaaaaatcaaccatctgacaaaaaaaaaaaagactagaggcaaggacg 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 524 aagaagtaaatctaaaaatcaaccatctgac---aaaaaaaaagactagaggcaaggacg 468
Query: 181 cccacaccagaggcctttgagaactgtcaaactaacagtatctccgcggaacagagctca 240
|||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 467 cccacaccagaggcctgtaagaactgtcaaactaacagtacctccgcggaacagagctca 408
Query: 241 ggggctactttactttattcttctcccctttgagcatttcctcaaatatttgcaatggca 300
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ggggctactttaccagaaacttctcccctttgagcatttcctcaaatatttgcaatggca 348
Query: 301 tctgctcagcccatatcagttaaaaggttttccaaagaccactagtagcaatcaagccag 360
||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 tctgctcagcctatattagctaaaaggttttccaaagaccactagtagcaatcaagccag 288
Query: 361 gccatgaggcacgagcaatgacatccgctacaaggggaggtaacagcagtgatcagaact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 gccatgaggcacgagcaatgacatccgctacaaggggaggtaacagcagtgatcagaact 228
Query: 421 cagtcacttacagctccagcttccctt 447
|||||||||||||||||||||||||||
Sbjct: 227 cagtcacttacagctccagcttccctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 844
Length adjustment: 10
Effective length of query: 437
Effective length of database: 834
Effective search space: 364458
Effective search space used: 364458
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_j22.g1 MSMg01no458_j22.g1 CHROMAT_FILE:
MSMg01no458_j22.g1 PHD_FILE: MSMg01no458_j22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:16 2005
(419 letters)
>mm_chr14_15605630_15606449
Length = 820
Score = 746 bits (386), Expect = 0.0
Identities = 411/424 (96%), Gaps = 9/424 (2%)
Strand = Plus / Plus
Query: 1 catctcctaaacttcatgtgcctgaaaagttcgaggtaagtattaaaacaagtggctatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catctcctaaacttcatgtgcctgaaaagttcgaggtaagtattaaaacaagtggctatt 260
Query: 61 tggttttgaaaataccaaactacttagtgaggaaagggcttgaacccaggaccttgttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggttttgaaaataccaaactacttagtgaggaaagggcttgaacccaggaccttgttct 320
Query: 121 tattagataagagctcttgtgaacggcacttcccaattttccttttgcattgacaaatat 180
|||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 321 tattagataagagctcttgtgaactgcacttctcaattttccttttgcattgacaaatat 380
Query: 181 aaatttaaattttagtatctcttgtccttcagagtacaaaatcctctaattcacatctac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaatttaaattttagtatctcttgtccttcagagtacaaaatcctctaattcacatctac 440
Query: 241 agtgttttttct-----tttttcagtttcatgtttcatcattgaaatgtgtttaaatctg 295
|||||||||||| | || |||||||||||||||||||||||||||||||||||
Sbjct: 441 agtgttttttctaacaat----cattttcatgtttcatcattgaaatgtgtttaaatctg 496
Query: 296 gtaaggtgccagatttttgtcagtagttgtttgggccgtgacgtcaccactgccttacag 355
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 497 gtaaggtgccagatttttgtcagtagttgtttgggctgtgacgtcaccactgccttacag 556
Query: 356 aatccaacacaaggtagtttaggagttggtaccaaagcgatctatttcaccatagatagt 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 aatccaacacaaggtagtttaggagttggtaccaaagcgatctatttcaccatagatagt 616
Query: 416 gtac 419
||||
Sbjct: 617 gtac 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 820
Length adjustment: 9
Effective length of query: 410
Effective length of database: 811
Effective search space: 332510
Effective search space used: 332510
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
