Query= MSMg01no459_f24.b1 MSMg01no459_f24.b1 CHROMAT_FILE:
MSMg01no459_f24.b1 PHD_FILE: MSMg01no459_f24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:16 2005
(397 letters)
>mm_chr14_46817044_46817840
Length = 797
Score = 723 bits (374), Expect = 0.0
Identities = 392/398 (98%), Gaps = 2/398 (0%)
Strand = Plus / Plus
Query: 1 atattcttatgtaaagaaagataactcatcaccgaccacggcttgtaagcttaaacagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atattcttatgtaaagaaagataactcatcaccgaccacggcttgtaagcttaaacagag 260
Query: 61 ggtgttgggtgatttgtggggttagaattataaaaacatagtcgcagagtcctatgttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtgttgggtgatttgtggggttagaattataaaaacatagtcgcagagtcctatgttaa 320
Query: 121 taaagcacatgaactaacactcagaactttccatattcttaattacctagtgaatctgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaagcacatgaactaacactcagaactttccatattcttaattacctagtgaatctgag 380
Query: 181 gtgaaaattaagtgaaatttcttgtacatttccccaaagtttctggggaatgtgagctaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgaaaattaagtgaaatttcttgtacatttccccaaagtttctggggaatgtgagctaa 440
Query: 241 atgtagttctgtat-attcagagatgctggaggaaggggagtcgaggaccccgtgagcct 299
||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgtagttctg-accattcagagatgctggaggaaggggagtcgaggaccccgtgagcct 499
Query: 300 ttctcatgtggttaaaggcccactgcccactggcttgcggaacgacacgagatcctgtcg 359
|||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||
Sbjct: 500 ttctcatgtggttaaaggcccactgcccactggcttgcggaatgagatgagatcctgtcg 559
Query: 360 atgactgtcactcaacaatgaccccagcactttctgag 397
||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atgactgtcactcaacaatgaccccagcactttctgag 597
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 397
Length of database: 797
Length adjustment: 9
Effective length of query: 388
Effective length of database: 788
Effective search space: 305744
Effective search space used: 305744
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no459_f24.g1 MSMg01no459_f24.g1 CHROMAT_FILE:
MSMg01no459_f24.g1 PHD_FILE: MSMg01no459_f24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:17 2005
(379 letters)
>mm_chr14_47013077_47013854
Length = 778
Score = 710 bits (367), Expect = 0.0
Identities = 376/379 (99%), Gaps = 1/379 (0%)
Strand = Plus / Minus
Query: 1 gtccatcacttatgagctctgagaccttggaggattttgttaagtttagaatctcatctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 gtccatcacttatgagctctgagaccttggaggattttgttaagtttagaatctcatctg 519
Query: 61 cagaagaagggtttgaagtgggtcgttgcaagggctcaagaacaaaggagaaattatggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 cagaagaagggtttgaagtgggtcgttgcaagggctcaagaacaaaggagaaattatggt 459
Query: 121 aatatccacgtgagagaactaaggatctaggttattacaaagatggcttctaatttcgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 aatatccacgtgagagaactaaggatctaggttattacaaagatggcttctaatttcgtt 399
Query: 181 ttaaattgatctgttttattacttgcaaaagttagccatggtgctggagtgtccttcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ttaaattgatctgttttattacttgcaaaagttagccatggtgctggagtgtccttcaaa 339
Query: 241 gtattctcttatagttaagatagacatctaaatggcgatgtttgaagaccccatgccatt 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 gtattcccttatagttaagatagacatctaaatggcgatgtttgaagaccccatgccatt 279
Query: 301 tgggacctagaatcaaggtactatgcctgcagaatcagaatttttttttttttcctgagt 360
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 278 tgggacctagaatcaaggtactatgcctgcagaatcagaa-ttttttttttttcctgagc 220
Query: 361 cagggagtataaatcttta 379
|||||||||||||||||||
Sbjct: 219 cagggagtataaatcttta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 778
Length adjustment: 9
Effective length of query: 370
Effective length of database: 769
Effective search space: 284530
Effective search space used: 284530
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
