Query= MSMg01no459_g12.b1 MSMg01no459_g12.b1 CHROMAT_FILE:
MSMg01no459_g12.b1 PHD_FILE: MSMg01no459_g12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:19 2005
(442 letters)
>mm_chr14_103258428_103259269
Length = 842
Score = 839 bits (434), Expect = 0.0
Identities = 440/442 (99%)
Strand = Plus / Minus
Query: 1 gattccaagtggaaagaaaaatgtgagtttgaatgtgctgctcatgttggaagggacggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 gattccaagtggaaagaaaaatgtgagtttgaatgtgctgctcatgttggaagggacggc 583
Query: 61 tgtgattgtgccagattcacatctgcttttattttgcagttactcctcttggcttcacta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 tgtgattgtgccagattcacatctgcttttattttgcagttactcctcttggcttcacta 523
Query: 121 gagcatatgtgacctacaggacacggtgcttttaaggtgactttgccttgctccccagat 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 522 gagcatatgtgacctacaggacacgatgcttttaaggtgactttgccttgctccccagat 463
Query: 181 acagatgttcccagagttgtgttcctaattaaatattgactataaaagtaaggatcgcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 acagatgttcccagagttgtgttcctaattaaatattgactataaaagtaaggatcgcag 403
Query: 241 gcaagtttgataagcataaaagttgttatggagatatggaaatccattcactggtaacac 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gcaagtttgaaaagcataaaagttgttatggagatatggaaatccattcactggtaacac 343
Query: 301 ttcatttttttggcctttgaaaagcagtgatgatagaggaccaacatgctttgtaagtca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ttcatttttttggcctttgaaaagcagtgatgatagaggaccaacatgctttgtaagtca 283
Query: 361 ccacgtctcctttggcaatttattttaatgtattttgttcccagaggaaagaaagtgatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 ccacgtctcctttggcaatttattttaatgtattttgttcccagaggaaagaaagtgatt 223
Query: 421 cacatgactcttaatgctttcc 442
||||||||||||||||||||||
Sbjct: 222 cacatgactcttaatgctttcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no459_g12.g1 MSMg01no459_g12.g1 CHROMAT_FILE:
MSMg01no459_g12.g1 PHD_FILE: MSMg01no459_g12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:19 2005
(449 letters)
>mm_chr14_103062166_103063023
Length = 858
Score = 702 bits (363), Expect = 0.0
Identities = 438/485 (90%), Gaps = 41/485 (8%)
Strand = Plus / Plus
Query: 1 atttattgtcgctcctgattttcatttgacattttgcaactgacctgaatcccctcttca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 179 atttattgtcgctcctgattttcatttgacattttgcaactgacctgaatcctctcttca 238
Query: 61 tgttccagagagagagcaagagaga----------ggaggttttgaacagtcagagtagg 110
|||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 239 tgttccagagagagag--agagagagcgtgagatgggaggttttgaacagtcagagtagg 296
Query: 111 tttaaaaatgagtatgtgaaaatattgagtaataaatattttaattcaagactaattcct 170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tttaaaaatgagtatgtgaaaatattgagtaataaatattttaattcaagactaattcct 356
Query: 171 aagtaatgt-------------aaa-acagaataattctaattcagacag---gcttctg 213
||||||||| ||| |||||||||||||||||||||||| |||||||
Sbjct: 357 aagtaatgtattatcccctaggaaatacagaataattctaattcagacaggctgcttctg 416
Query: 214 cagttcaatacagaataattctaattcttta---tgacttctgcagtgcagaagaacaaa 270
||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 417 cagttcaatacagaataattctaattc---agacagacttctgcagtgcagaagaacaag 473
Query: 271 cagctgggaacgttggcctccatccagtttgataaactagggacaggctactcctgttca 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 cagctgggaacgttggcctccatccagtttgataaactagggacaggctactcctgttca 533
Query: 331 tggaaatcttagcattcacacttccactgtaagacctatcatgg------tttatagttt 384
|||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 534 tggaaatcttagcattcacacttccactgtaagacctatcatgggggtcctttatcgttt 593
Query: 385 gtcttttgtaattttcaactgatttctctccacaagaaagagaaattaattttgctctaa 444
||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 594 gtcttttgtgattttcaactgatttctctccaaaagaaagagaaattaattttgctctaa 653
Query: 445 attta 449
|||||
Sbjct: 654 attta 658
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 858
Length adjustment: 10
Effective length of query: 439
Effective length of database: 848
Effective search space: 372272
Effective search space used: 372272
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
