Query= MSMg01no460_p22.b1 MSMg01no460_p22.b1 CHROMAT_FILE:
MSMg01no460_p22.b1 PHD_FILE: MSMg01no460_p22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:25 2005
(448 letters)
>mm_chr14_83709459_83710306
Length = 848
Score = 828 bits (428), Expect = 0.0
Identities = 440/444 (99%)
Strand = Plus / Minus
Query: 5 gaattcactacttgcttgttaaaactacatctcccatctaaataaaataaaaaagagcca 64
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 gaattcactacaagcttgttaaaactacatctcccatctaaataaaataaaaaagagcca 589
Query: 65 tgatcactaccactctgattcagactcaggccagtctgtagttcttacaattctattatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 tgatcactaccactctgattcagactcaggccagtctgtagttcttacaattctattatt 529
Query: 125 cttttgactccaactcaaaataagcaaaacaatctaattgcaaaagagaacaaattttta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 cttttgactccaactcaaaataagcaaaacaatctaattgcaaaagagaacaaattttta 469
Query: 185 aagagaattttatattatttaacatgcttctataacattttaataatctcatgctttata 244
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 aagagaacattatattatttaacatgcttctataacattttaataatctcatgctttata 409
Query: 245 gggcctttgatttatatacttacacatatcagttcataagacttctggggacatctgaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gggcctttgatttatatacttacacatatcagttcataagacttctggggacatctgaga 349
Query: 305 catgtttctctagatcactaattgtatttcacaataaaaattgtgtagtttagatgctgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 catgtttctctagatcactaattgtatttcacaataaaaattgtgtagtttagatgctgt 289
Query: 365 aaactaattaggtaggctttctgcttctgttaatatgcttcaaggatgcatggcactttt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 aaactaattaggtaggctttctgcttctgttaatatgcttcaaggatgcatggcactttt 229
Query: 425 tagtactattttgcaacttcttgt 448
||||||||||||||||||||||||
Sbjct: 228 tagtactattttgcaacttcttgt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no460_p22.g1 MSMg01no460_p22.g1 CHROMAT_FILE:
MSMg01no460_p22.g1 PHD_FILE: MSMg01no460_p22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:25 2005
(530 letters)
>mm_chr14_83572978_83573906
Length = 929
Score = 963 bits (498), Expect = 0.0
Identities = 526/544 (96%), Gaps = 15/544 (2%)
Strand = Plus / Plus
Query: 1 caggacagccagggctatacagagaaaccctgtctcgaaataccaaaaaaaaaaaaaaaa 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 caggacagccagggctagacagagaaaccctgtctcgaaataccaaaaaaaaaaaaaaaa 246
Query: 61 aaaaa--------------gagttaagcatgcataattcttgaattaattcatctgaaaa 106
||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 247 aaaaaaaaaaaaaaaaaaagagttaagcatgcata-ttcttgaattaattcatctgaaaa 305
Query: 107 tagaaataaagtattttaagtggcatactcatactattgtttactacagaagacaatgga 166
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 306 tagaaataaagtattttaagtggcatgctcatactattgtttactacagaagacaatgga 365
Query: 167 gaaactatgtccacatagattattagaatgcacaggtgagcaactgagcaagctctgtac 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gaaactatgtccacatagattattagaatgcacaggtgagcaactgagcaagctctgtac 425
Query: 227 actgttttagttttcaaaaccttgccattacaagaagttctcttaaaattttattagaca 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 actgttttagttttcaaaaccttgccattacaagaagttctcttaaaattttattagaca 485
Query: 287 agaatccaaaagtttaaattctgattaactgcttgcatagaagctagaagaaaaatagac 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 agaatccaaaagtttaaattctgattaactgcttgcatagaagctagaagaaaaatagac 545
Query: 347 aatgttttgtaatttctttctacaccagcagtggatgttaataaattagacattccaatt 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 aatgttttgtaatttctttctacaccagcagtggatgttaataaattagacattccaatt 605
Query: 407 tattcacatatataaaaatgatttaaattattaataatactgacatgaacttcaaaggaa 466
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 tattcacatatgtaaaaatgatttaaattattaataatactgacatgaacttcaaaggaa 665
Query: 467 agaatactaattttttttactaactacaatattttgatataaaatgtagcaaaattcctt 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 agaatactaattttttttactaactacaatattttgatataaaatgtagcaaaattcctt 725
Query: 527 atta 530
||||
Sbjct: 726 atta 729
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 929
Length adjustment: 10
Effective length of query: 520
Effective length of database: 919
Effective search space: 477880
Effective search space used: 477880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
