Query= MSMg01no464_f03.b1 MSMg01no464_f03.b1 CHROMAT_FILE:
MSMg01no464_f03.b1 PHD_FILE: MSMg01no464_f03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:03 2005
(410 letters)
>mm_chr14_80732279_80733088
Length = 810
Score = 708 bits (366), Expect = 0.0
Identities = 397/412 (96%), Gaps = 10/412 (2%)
Strand = Plus / Minus
Query: 6 ggaattcaccacatttc---acgcgaggtgtggcttctatctcggtttttcagaagaaat 62
||||||||||||| | | |||||||||||||||||||||||| |||||||||||||
Sbjct: 612 ggaattcaccaca---ccaaaggcgaggtgtggcttctatctcggtgtttcagaagaaat 556
Query: 63 cttttaagtcttacaattgcccaatgatagaagtgtctgtttttcatgatggcatctcag 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 cttttaagtcttacaattgcccaatgatagaagtgtctgtttttcatgatggcatctcag 496
Query: 123 accacacatgaaaatctgtgctaaagagatgatggaagatgaggccaaccagatgaggat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 accacacatgaaaatctgtgctaaagagatgatggaagatgaggccaaccagatgaggat 436
Query: 183 actaacgacaggagctggccatactggaaagaaaagtgtgtgattagagaagtagaggtt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 actaacgacaggagctggccatactggaaagaaaagtgtgtgattagagaagtagaggtt 376
Query: 243 tgggccgtgtgaagagtagctgacctctggggagaggagaagggctgtagatgacaacag 302
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tgggctgtgtaaagagtagctgacctctggggagaggagaagggctgtagatgacaacag 316
Query: 303 aaacacaatcaatcatgcatatcaaataaatcaatgaaattgctataaactaaaactgag 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aaacacaatcaatcatgcatatcaaataaatcaatgaaattgctataaactaaaactgag 256
Query: 363 atacaccttcctgtgtagcaactatc----atatactatgacagtcccagag 410
|||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 255 atacaccttcctgtgtagcaactatcatatatatactataacagtcccagag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 810
Length adjustment: 9
Effective length of query: 401
Effective length of database: 801
Effective search space: 321201
Effective search space used: 321201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no464_f03.g1 MSMg01no464_f03.g1 CHROMAT_FILE:
MSMg01no464_f03.g1 PHD_FILE: MSMg01no464_f03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:03 2005
(386 letters)
>mm_chr14_80541489_80542274
Length = 786
Score = 588 bits (304), Expect = e-172
Identities = 330/342 (96%), Gaps = 6/342 (1%)
Strand = Plus / Plus
Query: 48 tctccagctctggaattataggcattcactagtgtcttatcccagacatgttctttatag 107
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tctccagctctggaattataggcattcactagtgtcttatcccagacatgttctttataa 307
Query: 108 catctgccagctccctgtgggatccagcatggaaactctctggttgtcttcttagcacta 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 catctgccagctccctgtgggatccagcatggaaactctctggttgtcttcttagcacta 367
Query: 168 agatgtgctatatacctattttcctgtttacctggatgaatgtagggctagctgtgcact 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 agatgtgctatatacctattttcctgtttacctggatgaatgtagggctagctgtgcact 427
Query: 228 ctgcaaatggggcaaattgtacccatgctttttacctgtatttcatattttcttttcttt 287
|||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ctgcaaatggggcagagtgcacccatgctttttacctgtatttcatattttcttttcttt 487
Query: 288 tcttctctttctttttctttctttctttttttt------aatcaaggactcactatggct 341
|||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 488 tcttttctttctttttctttctttcttttttttttttttaatcaaggactcactatggct 547
Query: 342 gtgccctgggactcctgctgcagagacaaattctctatagct 383
||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 548 gtgccctgggactcctgctacagagacaaattctctatagct 589
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 386
Length of database: 786
Length adjustment: 9
Effective length of query: 377
Effective length of database: 777
Effective search space: 292929
Effective search space used: 292929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
