Query= MSMg01no464_h19.b1 MSMg01no464_h19.b1 CHROMAT_FILE:
MSMg01no464_h19.b1 PHD_FILE: MSMg01no464_h19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:16 2005
(301 letters)
>mm_chr14_72401739_72402439
Length = 701
Score = 532 bits (275), Expect = e-155
Identities = 294/301 (97%), Gaps = 3/301 (0%)
Strand = Plus / Minus
Query: 1 ctgtgtaaaccgtgggcactgttgttttttgtacctggctgctgggccaagagagaaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 ctgtgtaaaccgtgggcactgttgttttttgtacctggctgctgggccaagagagaaggg 586
Query: 61 aaatgggaaggcgaagctagaatgactccttggcaggcagtctcctggcctctcaatcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 aaatgggaaggcgaagctagaatgactccttggcaggcagtctcctggcctctcaatcat 526
Query: 121 gtctgctgctgctgctgctgctgctgcagaaggctcagcatactgcagctgcagaagggg 180
||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||
Sbjct: 525 gtctgctgctgctgctg-t--tgctgcagaaggctcagcatactacagctgcagaagggg 469
Query: 181 tgtggggcaggccaggcctgaggtgctgagggagaaggatgtaagcagtgagggagctgg 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 468 tgtggggcaggccaggcctgaggtgctgagggagaaggatgtaagctgtgagggagctgg 409
Query: 241 agggtcacctagctgagctgcccttatgcatacttccactgccatttctttgccttctat 300
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 agggtcagctggctgagctgcccttatgcatacttccactgccatttctttgccttctat 349
Query: 301 g 301
|
Sbjct: 348 g 348
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 301
Length of database: 701
Length adjustment: 9
Effective length of query: 292
Effective length of database: 692
Effective search space: 202064
Effective search space used: 202064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no464_h19.g1 MSMg01no464_h19.g1 CHROMAT_FILE:
MSMg01no464_h19.g1 PHD_FILE: MSMg01no464_h19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:16 2005
(456 letters)
>mm_chr14_72236160_72237015
Length = 856
Score = 866 bits (448), Expect = 0.0
Identities = 454/456 (99%)
Strand = Plus / Plus
Query: 1 ccttataatgtctttcatttgagaagtctttctcaaagacccaacctgactttgttttcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccttataatgtctttcatttgagaagtctttctcaaagacccaacctgactttgttttcg 260
Query: 61 cttgattcacagtgaggaggagtcccagtagaccgacacttatactctctaataacaagg 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 cttgattcacagtgaggaggagtcccagtagactgacacttatactctctaataacaagg 320
Query: 121 gccttcagtttgtttatgggcttggcatcctagcattggtgtcaggacttgtagtgtgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gccttcagtttgtttatgggcttggcatcctagcattggtgtcaggacttgtagtgtgtt 380
Query: 181 ctgtgggctggctgctcagtcttccagctgaaatgtacacatgtctatattttgagaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgtgggctggctgctcagtcttccagctgaaatgtacacatgtctatattttgagaaat 440
Query: 241 gaactgattttatgagaagaaagtgtgagatgtttagtttaataataatatctttggggt 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaactgatcttatgagaagaaagtgtgagatgtttagtttaataataatatctttggggt 500
Query: 301 tggagagaagcactgcggctctccccacctacctccatccatatatcataactggggaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggagagaagcactgcggctctccccacctacctccatccatatatcataactggggaag 560
Query: 361 gaaaagcataggacatggaaataaggctttcactttaaactctgaaaattaccagcacat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaaaagcataggacatggaaataaggctttcactttaaactctgaaaattaccagcacat 620
Query: 421 acgaattactcttttctttcattttaatatgcaaaa 456
||||||||||||||||||||||||||||||||||||
Sbjct: 621 acgaattactcttttctttcattttaatatgcaaaa 656
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
