Query= MSMg01no465_b03.b1 MSMg01no465_b03.b1 CHROMAT_FILE:
MSMg01no465_b03.b1 PHD_FILE: MSMg01no465_b03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:02 2005
(601 letters)
>mm_chr14_111704577_111705581
Length = 1005
Score = 1046 bits (541), Expect = 0.0
Identities = 585/601 (97%), Gaps = 4/601 (0%)
Strand = Plus / Minus
Query: 5 gaattcagttcccttctattagttcaaatagttttcataatttcctgactgtgagtgagc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gaattcagttcccttctattagttcaaatagttttcataatttcctgactgtgagtgagc 746
Query: 65 caaatgtagacacatttctaggcaatatgaacaagtcattaattctcagttatgtctaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 caaatgtagacacatttctaggcaatatgaacaagtcattaattctcagttatgtctaaa 686
Query: 125 agtgctaatattccatcaagcagagctctgtgatactgtgatcaccaaagaccatgtttg 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ggtgctaatattccatcaagcagagctctgtgatactgtgatcaccaaagaccatgtttg 626
Query: 185 ctgtcagcagactcaatgcttgacactaagtatataaatcagagaattgtcagacttatc 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 625 ctgtcagcagactcaatgcttgacactaagtatataaatcagagaattgtcagaattatc 566
Query: 245 atacttatgcccaagtatgaatttccactgtttgacatgtaatctgaataatgagctgcc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 atacttatgcccaagtatgaatttccactgtttgacatgtaatctgaataatgagctgcc 506
Query: 305 aaaaaatgataaact---aagaaagtagaaaagatgtattattcagctaaaggtgaatca 361
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 505 aaaaaatgataaactaagaagaaagtagaaaagatgtattattcagctaaaggggaatca 446
Query: 362 acagaaatttcttgggtgtgtgatgccttattaaagattttgatgtacaaaacaaattta 421
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agggaaatttcttgggtgtgtgatgccttattaaagattttgatgtacaaaacaaattta 386
Query: 422 catgagatgaacttcacctgaatttttattttcctacaataactcattctaaagtgcctt 481
||||||||||||||||| ||||||||||||||||||| || ||||||||||||| |||||
Sbjct: 385 catgagatgaacttcacttgaatttttattttcctacgatcactcattctaaagcgcctt 326
Query: 482 t-tactgaattagtagttatctctcctaagaaacgttttataacacaccaaattaactta 540
| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 325 tctactgaattagtagttatctctcctaagaaatgttatataacacaccaaattaactta 266
Query: 541 tgaagaattacttctttattcattctttgaaaaggaagaagtctttctttgcttgctatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 265 tgaagaattacttctttattcattctttgaaaaggaagaagtctttctttggttgctatg 206
Query: 601 a 601
|
Sbjct: 205 a 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1005
Length adjustment: 10
Effective length of query: 591
Effective length of database: 995
Effective search space: 588045
Effective search space used: 588045
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no465_b03.g1 MSMg01no465_b03.g1 CHROMAT_FILE:
MSMg01no465_b03.g1 PHD_FILE: MSMg01no465_b03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:02 2005
(527 letters)
>mm_chr14_111515147_111516072
Length = 926
Score = 988 bits (511), Expect = 0.0
Identities = 523/527 (99%), Gaps = 1/527 (0%)
Strand = Plus / Plus
Query: 1 aatttaaatttctgaagaagcacacacacacaaatgattctagcaatcaagtaaacatgg 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 aatttaaatttctgaataagcacacacacacaaatgattctagcaatcaagtaaacacgg 260
Query: 61 aaataaatatacttttaaaaacacattcctacttttactcagtagattataaaaaatatg 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 aaataaatatacttttaaaaacacatttctacttttactcagtagattataaaaaatatg 320
Query: 121 aggtacccttgaaaccttaactctcacttactactaatgtctgctgtgcttaattatcac 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 aggtacccttgaaaccttaactctcacttactactaatgtctgct-tgcttaattatcac 379
Query: 181 gtttcaagggctattgtgcttctgtgctttcaaagtgagccttgaggttcatggtttaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gtttcaagggctattgtgcttctgtgctttcaaagtgagccttgaggttcatggtttaga 439
Query: 241 tagagtgtttgtctctgatgtttcctctaaagaattgcagttattctctactgttaggtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tagagtgtttgtctctgatgtttcctctaaagaattgcagttattctctactgttaggtg 499
Query: 301 actgaaaaagagaaatatttgttagaatgctgtttgctgaccacctctactactaaagga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 actgaaaaagagaaatatttgttagaatgctgtttgctgaccacctctactactaaagga 559
Query: 361 aaaatatatggcacagtattgtctacatgtttatacacagttaagattatttcatgacct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aaaatatatggcacagtattgtctacatgtttatacacagttaagattatttcatgacct 619
Query: 421 gttgctttatactaccaatgaaagtaaatggtgtgacttggtgtatatgtgtacatatag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gttgctttatactaccaatgaaagtaaatggtgtgacttggtgtatatgtgtacatatag 679
Query: 481 tatatatagttacaatatttcatgaactgcttacttatttaaaaatg 527
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tatatatagttacaatatttcatgaactgcttacttatttaaaaatg 726
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 926
Length adjustment: 10
Effective length of query: 517
Effective length of database: 916
Effective search space: 473572
Effective search space used: 473572
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
