Query= MSMg01no467_g07.b1 MSMg01no467_g07.b1 CHROMAT_FILE:
MSMg01no467_g07.b1 PHD_FILE: MSMg01no467_g07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:14 2005
(503 letters)
>mm_chr14_80299311_80300213
Length = 903
Score = 708 bits (366), Expect = 0.0
Identities = 428/456 (93%), Gaps = 15/456 (3%)
Strand = Plus / Minus
Query: 3 agagcctctcaccttttgtgagggggggggcggg-----aatcaaagaatgaagtagaca 57
||||||||| | |||||||||||| ||| |||||||||||||||||||||
Sbjct: 448 agagcctcttatcttttgtgaggg-------gggaaaaaaatcaaagaatgaagtagaca 396
Query: 58 gaatatctgaagctaggtatctcaacactcaaaatttataattgaggaaaccaagaagag 117
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gaatatctgaagctatgtatctcaacactcaaaatttataattgaggaaaccaagaagag 336
Query: 118 atggcttcaacggttcagtcaacaaacaaccaatgagaccctgggcaatgtctcctgact 177
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 335 atggcttcaacggttcagtcaacaaacagccaatgagaccctgggcaatgtctcctgact 276
Query: 178 tgagagtctctcctcagactttcccttccagcttacctctttaaaaaaatatata--aac 235
||||||||||||||||||||||||||||||||| ||||||||||| | ||||||| ||
Sbjct: 275 tgagagtctctcctcagactttcccttccagctcacctctttaaatatatatatatgtac 216
Query: 236 atgtatattatttttgtatattaagcaaatgtgacagataggaccaactgagcctcagtt 295
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atgtatatta-atatgtatattaagcaaatgtgacagataggaccaactgagcctcagtt 157
Query: 296 tctccgtttttaaagtgaggccattacctggtgctccatcagtccaagatgtacccacct 355
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 156 tctccgtttttaaagtgaggccattacctggtgttccatcagtccaagatgtacccacct 97
Query: 356 accttgaagcagacaagtaaattgactgacttaagcaggtaactgtgaaatagcatggaa 415
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 96 accttgaagcagacaagtaaattgactgacgtaagcaggtaactgtgaaatagcatggaa 37
Query: 416 tcctgcacttggggagaaatagaaaatccatgccac 451
||||| ||||||||||||||||||||||||||||||
Sbjct: 36 tcctggacttggggagaaatagaaaatccatgccac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no467_g07.g1 MSMg01no467_g07.g1 CHROMAT_FILE:
MSMg01no467_g07.g1 PHD_FILE: MSMg01no467_g07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:14 2005
(411 letters)
>mm_chr14_80112074_80112885
Length = 812
Score = 758 bits (392), Expect = 0.0
Identities = 407/412 (98%), Gaps = 1/412 (0%)
Strand = Plus / Plus
Query: 1 tccacagatccttacccgtctggaagattatgtatgcctgggggagtctcaaaagaaccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccacagatccttacccgtctggaagattatgtatgcctgggggagtctcaaaagaaccg 260
Query: 61 aggaaacgtaaacatgaaggaggattgagaaaaggctgcaatgttctctgtccctcatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggaaacgtaaacatgaaggaggattgagaaaaggctgcaatgttctctgtccctcatac 320
Query: 121 agacctagaggaaaattatggcaacctggctggtcctgggccagtgctgttcccttggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agacctagaggaaaattatggcaacctggctggtcctgggccagtgctgttcccttggct 380
Query: 181 ctatacatctaaggcatcgaagactcccaaggatacggaatgactctgggtatcagctta 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 ctatacatctaaggcatcgaagactcccaaggatacggagtgactctgggtatcagctta 440
Query: 241 gcttatgttattttaggtgtttcaacagtgaaaccattgaggtagtgtggcttagtgaag 300
|| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 441 gcacatgttattttaggtgtttcaacagtgacaccattgaggtagtgtggcttagtgaag 500
Query: 301 gaatgtgggcttggacgggatagaatggggttgtcattccacagttataagttaatattc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaatgtgggcttggacgggatagaatggggttgtcattccacagttataagttaatattc 560
Query: 361 ttattaacttgggcaatcatgtgact-ctcagtatcctatttaaatcttata 411
|||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 561 ttattaacttgggcaatcatgtgactactcagtatcctatttaaatcttata 612
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 812
Length adjustment: 9
Effective length of query: 402
Effective length of database: 803
Effective search space: 322806
Effective search space used: 322806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
