Query= MSMg01no468_p16.b1 MSMg01no468_p16.b1 CHROMAT_FILE:
MSMg01no468_p16.b1 PHD_FILE: MSMg01no468_p16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:23 2005
(501 letters)
>mm_chr14_69070525_69071425
Length = 901
Score = 861 bits (445), Expect = 0.0
Identities = 487/501 (97%)
Strand = Plus / Plus
Query: 1 gagtaatttagcaaatttgcaaatctcattaacttaatccattctccttacaaacagctg 60
||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 201 gagtaatttagcaaatttgcatatctcattaacttaatccattctccttagaaacagctg 260
Query: 61 agtttgcataacaaaacctaatctcccccacggactctgtgcttttccttgggcttgctt 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 agtttgcataacaaaacctaatctcccccatggactctgtgcttttccttgggcttgctt 320
Query: 121 gcaccttaacagaatttgtgttcttgccaagtgtacttgctgtgttgtcttttcttctcc 180
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 gcaccttaacagaatttgtgttcttgcccggtgtacttgctgtgttgtcttttcttctcc 380
Query: 181 agtgatttaaactcttgtctcttttacaattattacaaattcctgtctcaatatctacct 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 agtgatttaaactcttgtctcttttacaattattgcaaattcctgtctcaatatctacct 440
Query: 241 cctactgttccctcaaacccacacaaagatctgaacaccagccttgctaaatttctcacc 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 441 cctactgttcccacaaacccacacaaagatctgaacaccagccttgctaaattcctcacc 500
Query: 301 gtattcaaagccaactactctggacccctcttatctgaaatctacagtaagtttctttat 360
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 501 atattcaaagccaactactctggacccctcttatctgaaatctacagtaaatttctttat 560
Query: 361 tctccttatagttgtcaatatcgctgttgtcttatcagacatgagagcctttttaaaact 420
|||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctccttatagtggtcaatgtcgctgttgtcttatcagacatgagagcctttttaaaact 620
Query: 421 gcactagctgcatgtacttaacgtagaggtgctgaagaaaactgtccacctctaagcttt 480
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcactagctgcatgtacttaacatagaggtgctgaagaaaactgtccacctctaagcttt 680
Query: 481 ctgttctcacaatagctctgt 501
|||||||||| ||||||||||
Sbjct: 681 ctgttctcacgatagctctgt 701
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 901
Length adjustment: 10
Effective length of query: 491
Effective length of database: 891
Effective search space: 437481
Effective search space used: 437481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no468_p16.g1 MSMg01no468_p16.g1 CHROMAT_FILE:
MSMg01no468_p16.g1 PHD_FILE: MSMg01no468_p16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:23 2005
(471 letters)
>mm_chr14_69222272_69223142
Length = 871
Score = 789 bits (408), Expect = 0.0
Identities = 456/472 (96%), Gaps = 2/472 (0%)
Strand = Plus / Minus
Query: 1 cagaatcagtaattctagagtccacttatcaactctcattgttggattctttctttccct 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 584 cagaatcagtaattctagagtccacttatcagctctcattgttggattctttctttccct 525
Query: 61 gtgggagtttcttaagaacagagctacttaagtatggctgcgtcttgaggttaagactgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 gtgggagtttcttaagaacagagctacttaagtatggctgcgtcttgaggttaagactgt 465
Query: 121 aaacttataacactttcttctgacctggaaatacattcctatttcacatgga-gtcttaa 179
||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||
Sbjct: 464 aaacttataacactttcttctgacctggaaatacattcctatttcacgt-gacgtcttaa 406
Query: 180 tctacttgtgagtaacctctaagcccctgctggctttgtctgcttgcttgcttgtttcct 239
||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 405 tctacttgtgagtaaccactaagcctctgctggctttgtttgcttgcttgcttgtttcct 346
Query: 240 tgtgttattttttctctgacacaattaactttgtcatttttgttttgctttgcttttgaa 299
||||||| | |||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 345 tgtgttaataactctctgacacaaataactttgtcatttttgttttgttttgcttttgaa 286
Query: 300 acaactatacttatttgctatatgtggatgtgctggtcagaggacaattctcaggagttc 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 gcaactatacttatttgctatatgtggatgtgctggtcagaggacaattctcaggagttc 226
Query: 360 gttgtctccatcctacatacctatatgaggagctcagaggacaatttagtaaagtccgtt 419
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 225 gttgtctccatcctacatacatatatgaggagctcagaggacaatttagtaaagtccgtt 166
Query: 420 ctttctatccatctttatatgggttccaaggattgaactcaggtcatcaggc 471
|||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 165 ctttctatccatctttatatgggttccaaggattgaactcaggtcaccaggc 114
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space: 396921
Effective search space used: 396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
