Query= MSMg01no470_o24.b1 MSMg01no470_o24.b1 CHROMAT_FILE:
MSMg01no470_o24.b1 PHD_FILE: MSMg01no470_o24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:00 2005
(318 letters)
>mm_chr14_101854671_101855389
Length = 719
Score = 578 bits (299), Expect = e-169
Identities = 314/319 (98%), Gaps = 1/319 (0%)
Strand = Plus / Plus
Query: 1 attcctcttcataaatcatatgaactctttaaaaatatagaacatatgtgtataatatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcctcttcataaatcatatgaactctttaaaaatatagaacatatgtgtataatatat 260
Query: 61 gcatatatgtatgcccacatatgtacaacatacatgtccaagggaaataaggacagtaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcatatatgtatgcccacatatgtacaacatacatgtccaagggaaataaggacagtaaa 320
Query: 121 acttcaatacaattttaagtaaatttctgcctaaaatttgcctctggatagaaaattacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acttcaatacaattttaagtaaatttctgcctaaaatttgcctctggatagaaaattacc 380
Query: 181 actaatacaccaacaagcaaacaaattcaatcccgtgtcttcaaaaagctgctgtcagca 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acgaatacaccaacaagcaaacaaattcaatcccgtgtcttcaaaaagctgctgtcagca 440
Query: 241 ctagcacatat-gatcttcctcaccaaggctgtttacactaactagtttatgactttctt 299
|||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 ctagcacagagcgatcttcctcaccaaggctgtttacactaactagtttaggactttctt 500
Query: 300 tgagacaccagaaaatgaa 318
|||||||||||||||||||
Sbjct: 501 tgagacaccagaaaatgaa 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 719
Length adjustment: 9
Effective length of query: 309
Effective length of database: 710
Effective search space: 219390
Effective search space used: 219390
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no470_o24.g1 MSMg01no470_o24.g1 CHROMAT_FILE:
MSMg01no470_o24.g1 PHD_FILE: MSMg01no470_o24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:01 2005
(337 letters)
>mm_chr14_102002415_102003151
Length = 737
Score = 629 bits (325), Expect = 0.0
Identities = 334/337 (99%)
Strand = Plus / Minus
Query: 1 agttattggcactgtgtgccacatttccctgtgcacatcagttgacttcatatgcctctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 agttattggcactgtgtgccacatttccctgtgcacatcagttgacttcatatgcctctt 478
Query: 61 caggtgggtcatgtcgggccaactgtctttgcagaatttacagtaaacaagctcaaaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 caggtgggtcatgtcgggccaactgtctttgcagaatttacagtaaacaagctcaaaagt 418
Query: 121 ggtgactcttcagccagacaagctgacacattcaacagttttatcacccaagggtttgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ggtgactcttcagccagacaagctgacacattcaacagttttatcacccaagggtttgct 358
Query: 181 tcaaacaaagtaggttaagtaaggctctgggtacctttgccatgcaaagaggattcctgt 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 357 tcaaacaaagtaggttaagtaaggctctgggtacctttgccatgcatagaggattcctgt 298
Query: 241 ttgctttgtcccatgttctttatttgaaacggagatccaagctctttgctgaaggagcct 300
||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 297 ttgctttgtcccaagttctttatttgaaacggagatccaagctctttgctgagggagcct 238
Query: 301 gctctattctgcactcactgagcgaagtctacaaggc 337
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 gctctattctgcactcactgagcgaagtctacaaggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 737
Length adjustment: 9
Effective length of query: 328
Effective length of database: 728
Effective search space: 238784
Effective search space used: 238784
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
