Query= MSMg01no471_a19.b1 MSMg01no471_a19.b1 CHROMAT_FILE:
MSMg01no471_a19.b1 PHD_FILE: MSMg01no471_a19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:09 2005
(690 letters)
>mm_chr14_96427868_96428961
Length = 1094
Score = 1295 bits (670), Expect = 0.0
Identities = 685/692 (98%), Gaps = 4/692 (0%)
Strand = Plus / Plus
Query: 3 ggaattcattgcatttccatcattgactggagataatctgaacagcaagagcaagcttta 62
|||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 203 ggaattcattgcatttgcatcattgactggagataatctgaatagcaagagcaagcttta 262
Query: 63 aacagtgatttttaacatggtgtcccttcatggg----ttttttttcacccctttacagc 118
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 263 aacagtgatttttaacatggtgtcccttcatggggtttttttttttcacccctttacagc 322
Query: 119 ccaaagcatcagaaaaggtagactccaataaaagaaagaagaaaataatacctaaaaata 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ccaaagcatcagaaaaggtagactccaataaaagaaagaagaaaataatacctaaaaata 382
Query: 179 aagcaagaaatgccatcactccaacaccaatttccaaggtaaagagatgtaaaaatgaaa 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aagcaagaaatgccatcactccaacaccaatttccaaggtaaagagatgtaaaaatgaaa 442
Query: 239 gagcatgcactatctcagtcctatttcaaattctgagactaagcctgctgttcagctgct 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gagcatgcactatctcagtcctatttcaaattctgagactaagcctgctgttcagctgct 502
Query: 299 gcttaaagaaagcaaaggataaggcatttgaatttcaactagatgtttaaagagggagcg 358
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gcttaaagaaagcagaggataaggcatttgaatttcaactagatgtttaaagagggagcg 562
Query: 359 ctctgaaagtaataccagggaatatatatgggtgcttagaaaattatataatagttcaaa 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ctctgaaagtaataccagggaatatatatgggtgcttagaaaattatataatagttcaaa 622
Query: 419 taatggtttttcttcagtatggaataaataccccacatcattgaattggatgtaaattaa 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 taatggtttttcttcagtatggaataaataccccacatcattgaattggatgtaaattaa 682
Query: 479 atctaaagacaaaaactaaataataagtatgaacaaaatcactcatatttaaactcaatt 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 atctaaagacaaaaactaaataataagtatgaacaaaatcactcatatttaaactcaatt 742
Query: 539 agctcactctctgtcatgttttataaactcagagaacatcaaatgaagatgtatagcaca 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 agctcactctctgtcatgttttataaactcagagaacatcaaatgaagatgtatagcaca 802
Query: 599 accattttgtgcttgacattttacaggaacatactgagaacaaaggaatatatgcccatt 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 accattttgtgcttgacattttacaggaacatactgagaacaaaggaatatatgcccatt 862
Query: 659 ataaaaattgcattatttattgaagctttctt 690
||||||||||||||||||||||||||||||||
Sbjct: 863 ataaaaattgcattatttattgaagctttctt 894
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1094
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1084
Effective search space: 737120
Effective search space used: 737120
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no471_a19.g1 MSMg01no471_a19.g1 CHROMAT_FILE:
MSMg01no471_a19.g1 PHD_FILE: MSMg01no471_a19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:10 2005
(559 letters)
>mm_chr14_96551240_96552198
Length = 959
Score = 1073 bits (555), Expect = 0.0
Identities = 558/559 (99%)
Strand = Plus / Minus
Query: 1 ctatgtgtgttgaccatgttgatgtagagggccttgatctatggtgtcctccatcccctc 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 ctatgtgtattgaccatgttgatgtagagggccttgatctatggtgtcctccatcccctc 585
Query: 61 tggctcttatactctttctgtatcttccccgtggttcactgagccctgatggcaagatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 tggctcttatactctttctgtatcttccccgtggttcactgagccctgatggcaagatta 525
Query: 121 gagtgagaaatactatttcagtagagtgttcttagttttctcagtacctctgtgggtata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 gagtgagaaatactatttcagtagagtgttcttagttttctcagtacctctgtgggtata 465
Query: 181 atttgacactctaaataccatgttttttacagattttgattttgtctatcttgttcttac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 atttgacactctaaataccatgttttttacagattttgattttgtctatcttgttcttac 405
Query: 241 cctttcatatgctatgaaagccctggtttgtttgcctctttgttttctagacagaaagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 cctttcatatgctatgaaagccctggtttgtttgcctctttgttttctagacagaaagaa 345
Query: 301 aggaaagagaggggagaggggtgtagttgagtggtcgacaaagggagaaggatctagaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 aggaaagagaggggagaggggtgtagttgagtggtcgacaaagggagaaggatctagaaa 285
Query: 361 agagtggggccaggaaaaccatcatcagaatatgttgcataaaaatacttattttcaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 agagtggggccaggaaaaccatcatcagaatatgttgcataaaaatacttattttcaata 225
Query: 421 aaagaatacgaaagaaaaatctctaaaatacaaaagtaattattttataattttggttca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 aaagaatacgaaagaaaaatctctaaaatacaaaagtaattattttataattttggttca 165
Query: 481 tattattttaggataaggacacaatatgaaacttaacttcctaacatattttcactgtat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 tattattttaggataaggacacaatatgaaacttaacttcctaacatattttcactgtat 105
Query: 541 actgtactattgctaactc 559
|||||||||||||||||||
Sbjct: 104 actgtactattgctaactc 86
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 959
Length adjustment: 10
Effective length of query: 549
Effective length of database: 949
Effective search space: 521001
Effective search space used: 521001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
