NAACTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCTGCATTTCTGACTAGGAGGTATCTGTGCCTTCTCTTGGGT
TGTTTTCCTTCTGTTTGTTTTGTTGTTATTCCACTAAAACCTGTTTGTTG
TATCTTAAGAGCTTGAAGGGAGTTGGATTCAGATGGGAGAGGAGTTTGGG
AGGAACTAAAAGGAGCAGAGTTAAGGCAAACCATAATTTGGATATATCAT
GAAAATTCTGTTTTCAATTCAAGAAAAGAATGATAACTGACTAAATATAT
TGTCAAAGGTTACAGATGTTTTTCTCTTCAATGGAAATTTCCAAACAAAA
AATGAAAGTTAACATCTCTGGTCATCTGCAGGATTTTTAGCAAGATGCAG
TTCACATCATGTTCCACCTGTTGCTTCATGCTTTAAACAGGCTTCCCATC
TTCATTCCATCTTGGTGCAATACAAAAGATAAACATAGAAACTGAATAGC
AAAGAAACAAACAAACAACAACAACAAAGCCAAGGCAAATGAGATTAATC
TTTCAATATCTGTAACTACTGAAATCTATAATCTCATCACAATATTGTCA
ACAGTTCAGAAAACTTTGAACAAAGGACTGTCAACTGCTCCACCACCAGC
TAACAATATTCCTTAGTTTTAATAATACCATTCTATGCTTTCTTGAATAC
AACATTTATTTCTTTCATATATAATTTAAATGATTCTAAAATTAACAGGA
GCATTTTGAGTTAG

NNCCAATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCA
GAGAAGCACTTGAGAAAATGTTCAACATCCTTAATCATCAGGGAAATGCA
AATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGA
TCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGA
ACACTCCTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAA
ATCAGTCTGGCGGTTCCTCAGAAAACTGGACATAGTACTACCGGAGGATC
CAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACAGGTAAG
AAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAG
AAGCTGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAA
TGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAA
TTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAG
TGAGGTAACACATTCACAAAGAAACTCACACAATATGTATTCACTGATAA
GTGGATATTAGCCCCAAACCTAGGATACCCAAGATATAAGATATAATTTG
CTAAACACATGAAACTCAAGAAGAATGAAGACTGAAGTGTGGACACTATG
CCCCTCCTTAGATTG

Query= MSMg01no471_o19.b1 MSMg01no471_o19.b1 CHROMAT_FILE:
MSMg01no471_o19.b1 PHD_FILE: MSMg01no471_o19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:21 2005
         (684 letters)



>mm_chr14_81588885_81589971
          Length = 1087

 Score = 1222 bits (632), Expect = 0.0
 Identities = 670/684 (97%), Gaps = 3/684 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcctgcatttctgactaggaggtatctgtgccttctcttgggttgttttccttct 63
           ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctgcatgtgtgactaggaggtatctgtgccttctcttgggttgttttccttct 263

                                                                       
Query: 64  gtttgttttgttgttattccactaaaacctgtttgttgtatcttaagagcttgaagggag 123
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtttgttttgttgttattccactgaaacctgtttgttgtatcttaagagcttgaagggag 323

                                                                       
Query: 124 ttggattcagatgggagaggagtttgggaggaactaaaaggagcagagttaaggcaaacc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttggattcagatgggagaggagtttgggaggaactaaaaggagcagagttaaggcaaacc 383

                                                                       
Query: 184 ataatttggatatatcatgaaaattctgttttcaattcaagaaaagaatgataactgact 243
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 384 ataatttggatatatcatgaaaattctgttttcaattcaagaaaaaaatgataactgact 443

                                                                       
Query: 244 aaatatattgtcaaaggttacagatgtttttctcttcaatggaaatttccaaacaaaaaa 303
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 444 aaatatattgtcaaaggttacagatgtttttctcttcaatggaactttccaaacaaaaaa 503

                                                                       
Query: 304 tgaaagttaacatctctggtcatctgcaggatttttagcaagatgcagttcacatcatgt 363
           |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgaatgttaacatctctggtaatctgcaggatttttagcaagatgcagttcacatcatgt 563

                                                                       
Query: 364 tccacctgttgcttcatgctttaaacaggcttcccatcttcattccatcttggtgcaata 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tccacctgttgcttcatgctttaaacaggcttcccatcttcattccatcttggtgcaata 623

                                                                       
Query: 424 caaaagataaacatagaaactgaatagcaaagaaacaaacaaacaacaacaacaa---ag 480
           |||||||||||||| ||||||||||||||||||||||||||||||||||||||||   ||
Sbjct: 624 caaaagataaacatggaaactgaatagcaaagaaacaaacaaacaacaacaacaacaaag 683

                                                                       
Query: 481 ccaaggcaaatgagattaatctttcaatatctgtaactactgaaatctataatctcatca 540
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 684 ccaaggcaaatgagattaatctttcaatatccgtaactactgaaatctataatctcatca 743

                                                                       
Query: 541 caatattgtcaacagttcagaaaactttgaacaaaggactgtcaactgctccaccaccag 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||
Sbjct: 744 caatattgtcaacagttcagaaaactttgaacaaaggactgtcaactgctccaccatgag 803

                                                                       
Query: 601 ctaacaatattccttagttttaataataccattctatgctttcttgaatacaacatttat 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ctaacaatattccttagttttaataataccattctatgctttcttgaatacaacatttat 863

                                   
Query: 661 ttctttcatatataatttaaatga 684
           ||||||||||||||||||||||||
Sbjct: 864 ttctttcatatataatttaaatga 887


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 684
Length of database: 1087
Length adjustment: 10
Effective length of query: 674
Effective length of database: 1077
Effective search space:   725898
Effective search space used:   725898
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)