Query= MSMg01no474_j14.b1 MSMg01no474_j14.b1 CHROMAT_FILE:
MSMg01no474_j14.b1 PHD_FILE: MSMg01no474_j14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:07 2005
(631 letters)
>mm_chr14_104620781_104621812
Length = 1032
Score = 1164 bits (602), Expect = 0.0
Identities = 620/626 (99%), Gaps = 1/626 (0%)
Strand = Plus / Minus
Query: 7 gaattcctctactttc-cacacaaaaggacaaaattcagtggtaattttggttgtaaaca 65
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 gaattcctctacaatcatacacaaaaggacaaaattcagtggtaattttggttgtaaaca 773
Query: 66 tcaacaagctcaacatggataacaaattgctcatgagctgtggagaaaagataggagcct 125
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 772 tcaacaagctcaacatggataacaaattgctcatgagctgtggagaaaagttaggagcct 713
Query: 126 gtgtcctccaggccctgccactctgcattagaggtcgtcatgtttttgtcttgtatttgc 185
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 gtgtcctccaggccccgccactctgcattagaggtcgtcatgtttttgtcttgtatttgc 653
Query: 186 tacgcatgaggttatatcctgtttctcttgggtccctgtcaagcataataaataaaaata 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 tacgcatgaggttatatcctgtttctcttgggtccctgtcaagcataataaataaaaata 593
Query: 246 accttggccttccataggcaaaatattagcttgtgtggtgttttcggatgtcttttttct 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 accttggccttccataggcaaaatattagcttgtgtggtgttttcggatgtcttttttct 533
Query: 306 cttcttctagttgtttttccattacctgtgagcccagaccctctgccagctctgggaaca 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 cttcttctagttgtttttccattacctgtgagcccagaccctctgccagctctgggaaca 473
Query: 366 ctttgcccttggaaggctaggggtgacctctccaggtcagcctgtgagagtagagagacc 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ctttgcccttggaaggctaggggtgacctctccaggtcagcctgtgagagtagagagacc 413
Query: 426 agcatacttggcaatgcggctagttcacggtggccaggaaggaaccaacaaacaaggaaa 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 agcatacttggcaatgcggctagttcacggtggccaggaaggaaccaacaaacaaggaaa 353
Query: 486 ttctcaggtgcactcacttaactgcttagtgagagagaaacgaaagcatttgtggcagcg 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ttctcaggtgcactcacttaactgcttagtgagagagaaacgaaagcatttgtggcagcg 293
Query: 546 aaatggggcttgttggttttcacaagaggaaaacagggtcagtgtgtaggcttgtatgcc 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 aaatggggcttgttggttttcacaagaggaaaacagggtcagtgtgtaggcttgtatgcc 233
Query: 606 tttgcgaacctctgtatctttgtgtc 631
||||||||||||||||||||||||||
Sbjct: 232 tttgcgaacctctgtatctttgtgtc 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1032
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1022
Effective search space: 634662
Effective search space used: 634662
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no474_j14.g1 MSMg01no474_j14.g1 CHROMAT_FILE:
MSMg01no474_j14.g1 PHD_FILE: MSMg01no474_j14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:07 2005
(316 letters)
>mm_chr14_104456115_104456830
Length = 716
Score = 601 bits (311), Expect = e-176
Identities = 314/315 (99%)
Strand = Plus / Plus
Query: 1 tggtgcctggcaaacagatgcctacaaaagtccttccatttcctttcttcttaaccggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 tggtgcctggcaaacagatgcctacaaaagtccttccatttcctttcttcttacccggtg 260
Query: 61 ctccctgatctctaccttaaatgtaggccatgaccaaatgacagagtttagtagaagatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctccctgatctctaccttaaatgtaggccatgaccaaatgacagagtttagtagaagatg 320
Query: 121 accaaatgactgagtttagtccctgcttgccagtggacaagtgaccaagacagggaggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 accaaatgactgagtttagtccctgcttgccagtggacaagtgaccaagacagggaggtg 380
Query: 181 cccagaagttcaaggaaagccctcattgttgaagccaccacacttaggacccaggatttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccagaagttcaaggaaagccctcattgttgaagccaccacacttaggacccaggatttg 440
Query: 241 gaggaattgagctggagcatgggagcctcctcgctgagcatgggctctcattgcatctga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaggaattgagctggagcatgggagcctcctcgctgagcatgggctctcattgcatctga 500
Query: 301 tgttgctatgctgtc 315
|||||||||||||||
Sbjct: 501 tgttgctatgctgtc 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
