Query= MSMg01no475_b24.b1 MSMg01no475_b24.b1 CHROMAT_FILE:
MSMg01no475_b24.b1 PHD_FILE: MSMg01no475_b24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:48 2005
(470 letters)
>mm_chr14_115905950_115906820
Length = 871
Score = 797 bits (412), Expect = 0.0
Identities = 454/468 (97%), Gaps = 3/468 (0%)
Strand = Plus / Minus
Query: 5 gaattcacagtcttttctg-atataaaatcttcattgaatatgcaatcgtcattgaatag 63
|||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 gaatgcacagtctttgctgaatataaaatcttcattgaatatgcaatcgtcattgaatag 612
Query: 64 tgtccactaactatacagtccttgctgaatagaaagtcttacctgaatgtactatcttca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tgtccactaactatacagtccttgctgaatagaaagtcttacctgaatgtactatcttca 552
Query: 124 caagatgtacagtctgctgggtgtgtattcgtt-actgtatatacaacatgactagatgt 182
|||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||
Sbjct: 551 caagatgtacagtctgctgggtgtgtattc-ttcactgtatatactacatgactagatgt 493
Query: 183 acaatctttgctgcatgtgcagtgttcactggagtcagtctgctatggatatacactgca 242
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 492 acaatctttgctgcatgtgcagtgttcactggagtcagtctgctatggatgtacactgca 433
Query: 243 aactagacatgtaacctacactggacatacagtgttcactggatgttcagtcctcactga 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aactagacatgtaacctacactggacatacagtgttcactggatgttcagtcctcactga 373
Query: 303 gtgtactcttatcactgaacttagtcttcccttaatgaagtatcttcacagaatttacaa 362
|||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gtgtactcttgtcaccgaacttagtcttcccttaatgaagtatcttcacagaatttacaa 313
Query: 363 ccctcactaaaagtacagtcctcactgaacatactgcccttgttgaatgtccagtcttag 422
| |||||||||||||||||||||||||||||||||| |||| |||||||| |||| ||||
Sbjct: 312 ctctcactaaaagtacagtcctcactgaacatactgtccttattgaatgtacagttttag 253
Query: 423 ctgaatgtcctttcctcactgaatgtacagtttttgctatatgtatag 470
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ctgaatgtcctttcctcactgaatgtacagtttttgctatatgtatag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 871
Length adjustment: 10
Effective length of query: 460
Effective length of database: 861
Effective search space: 396060
Effective search space used: 396060
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no475_b24.g1 MSMg01no475_b24.g1 CHROMAT_FILE:
MSMg01no475_b24.g1 PHD_FILE: MSMg01no475_b24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:48 2005
(368 letters)
>mm_chr14_115732060_115732827
Length = 768
Score = 658 bits (340), Expect = 0.0
Identities = 364/382 (95%), Gaps = 16/382 (4%)
Strand = Plus / Plus
Query: 1 tattgaaaatgaattaacactgccgtgctgactttattgacggtgaatttcttgatctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tattgaaaatgaattaacactgccgtgctgactttattgacggtgaatttcttgatctca 244
Query: 61 aatgtatctgttctggatttttaaagaacaatcttatattgtcttttgcaaattatattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 aatgtatctgttctggatttttaaagaacaatcttatattgtcttttgcaaattatattc 304
Query: 121 tttgcaa----------------agatctgtcagtttctaaaatttccttagtaagggca 164
||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 305 tttgcaatagatattctttgcaaagatctgtcagtttctaaaatttccttagtaagggca 364
Query: 165 cctgattcagataattgattccaaagtagaaacttttgatccaattatccactcaaattg 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 cctgattcagataattgattccaaagtagaaacttttgatccaattatccactcaaattg 424
Query: 225 acctttcttgtgaaacactgcttgaatcgctctatccagcttatgtttaattacagtatc 284
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 425 acctttcttgtgaaacactgcttgaatctctctatccagcttatgtttaattacagtatc 484
Query: 285 tgactatgtttaattaacaaatctgagtaatgtttaatgagctcccatgtttaattactg 344
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tgactatgtttaattatcaaatctgagtaatgtttaatgagctcccatgtttaattactg 544
Query: 345 tatctgactaatataattactc 366
||||||||||||||||||||||
Sbjct: 545 tatctgactaatataattactc 566
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
