Query= MSMg01no475_n12.b1 MSMg01no475_n12.b1 CHROMAT_FILE:
MSMg01no475_n12.b1 PHD_FILE: MSMg01no475_n12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:45 2005
(244 letters)
>mm_chr14_31546381_31547021
Length = 641
Score = 451 bits (233), Expect = e-131
Identities = 238/241 (98%), Gaps = 3/241 (1%)
Strand = Plus / Minus
Query: 1 cactggtgatataaaagaaaatccagatactactgaaaactcttcctttacagcagttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 cactggtgatataaaagaaaatccagatactactgaaaactcttcctttacagcagttat 379
Query: 61 agaagattattgaagtggaatggggaaaaagagttaatacataaaacttgcaactgtggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 agaagattattgaagtggaatggggaaaaagagttaatacataaaacttgcaactgtggt 319
Query: 121 gtcacgggtattaatgattagaacagttttggtttttggtttattcatttgttttgtttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gtcacgggtattaatgattagaacagttttggtttttggtttattcatttgttttgtttt 259
Query: 181 gaagaagaagaacaaaaacaactctaataatctggtagggtgttctggtagaagtgttta 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gaagaagaa---caaaaacaactctaataatctggtagggtgttctggtagaagtgttta 202
Query: 241 c 241
|
Sbjct: 201 c 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 641
Length adjustment: 9
Effective length of query: 235
Effective length of database: 632
Effective search space: 148520
Effective search space used: 148520
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no475_n12.g1 MSMg01no475_n12.g1 CHROMAT_FILE:
MSMg01no475_n12.g1 PHD_FILE: MSMg01no475_n12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:45 2005
(201 letters)
>mm_chr14_31397329_31397929
Length = 601
Score = 358 bits (185), Expect = e-103
Identities = 197/201 (98%)
Strand = Plus / Plus
Query: 1 aggccagggcaagcctcaggcctaggaacagaggcattccccacagactaaaagcaggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggccagggcaagcctcaggcctaggaacagaggcattccccacagactaaaagcaggtg 260
Query: 61 ctggcctctcactgaaagaggacatgaatgtctcggggctgaatctaggagagggttgca 120
||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 261 ctggcctctcagtgaaagaggacatgaatgtctcagggctgaatctaggagggggttgca 320
Query: 121 aaggaggttaaaagggctgaaattacatctctgctgttttatttctccatctgggacgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaggaggttaaaagggctgaaattacatctctgctgttttatttctccatctgggacgat 380
Query: 181 cattctctctaagttttttcg 201
||||||||| |||||||||||
Sbjct: 381 cattctctccaagttttttcg 401
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 201
Length of database: 601
Length adjustment: 8
Effective length of query: 193
Effective length of database: 593
Effective search space: 114449
Effective search space used: 114449
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
