Query= MSMg01no477_m20.b1 MSMg01no477_m20.b1 CHROMAT_FILE:
MSMg01no477_m20.b1 PHD_FILE: MSMg01no477_m20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:21 2005
(615 letters)
>mm_chr14_55998608_55999622
Length = 1015
Score = 986 bits (510), Expect = 0.0
Identities = 587/625 (93%), Gaps = 20/625 (3%)
Strand = Plus / Plus
Query: 1 catatactaaaataagtttgctcgttagacacaaggctgattccccactctggatggggc 60
||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||
Sbjct: 191 catatactaaaataagtttgctcattagacacaaggctgatttcccactctggatagggc 250
Query: 61 aaatcagttggctcttcctcaggggacatctgcctgtgcccagactgcgtcatcggcatt 120
|||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 251 aaatcagttgactcttcctcaggggacaactgcctgtgcccagactgtgtcatcggcatt 310
Query: 121 gccctcaggtacttaaagttcactaatttgtaactaatttttaagacaaagaaggtacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 311 gccctcaggtacttaaagttcactaatttgtaactaatttttaagacaaagaaggtagag 370
Query: 181 agaccacacacacacacacacacacacacacacacacacacaca----------tagact 230
|||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 371 agaccacacacacacacacacacacacacacacacacacacacacacaaacacatagact 430
Query: 231 cttgtctgacttcaaagccaggtgctttttgtctttttgcaaattttccctaaacgttct 290
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 cttatctgacttcaaagccaggtgctttttgtctttttgcaaattttccctaaacgttct 490
Query: 291 tataaaattttccaaaatcttttaaaattttacaaaaagcatatgttttataagcattaa 350
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 491 tataaaattttccaaaatctttttaaattttacaaaaagcatatgttttataagcattaa 550
Query: 351 tccttgcttattaatccacaacgttagaagtgttcttttttgagtagctcaggtatcgtc 410
|||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||
Sbjct: 551 tccttgcttattaatccacaacattagaagtgttcttttttgagtagctcagatattgtc 610
Query: 411 ctcttcaggaccagtgggttcgcaaccttcctaatgatgcaaccctttaatacagttctt 470
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ctcttcaagatcagtgggttcgcaaccttcctaatgatgcaaccctttaatacagttctt 670
Query: 471 catgttgtggtgatccccaaccacaaaatcatcttattgccacctcagaactgtacattt 530
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 catgttgtggtgatccccagccacaaaatcatcttattgccacctcagaactgtacattt 730
Query: 531 gctactgttataaatcgtaatgtaaatatctgatatgcangctatctgttaagtgacctc 590
|||||||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 731 gctactgttacaaatcgtaatgtaaatatctgatatgcaggctatctgttaagt------ 784
Query: 591 tgtgaaagggtcatttaaccccaaa 615
|||||||||||| ||||||||
Sbjct: 785 ----aaagggtcatttgaccccaaa 805
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1015
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1005
Effective search space: 608025
Effective search space used: 608025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no477_m20.g1 MSMg01no477_m20.g1 CHROMAT_FILE:
MSMg01no477_m20.g1 PHD_FILE: MSMg01no477_m20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:21 2005
(535 letters)
>mm_chr14_56171198_56172132
Length = 935
Score = 731 bits (378), Expect = 0.0
Identities = 396/402 (98%)
Strand = Plus / Minus
Query: 1 ttcaccactagcttctgtaacacattttctgtaacaccaatctggggtgtaggaaacctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ttcaccactagcttctgtaacacattttctgtaacaccaatctggggtgtaggaaacctt 343
Query: 61 atctcaagcaaacatacaaactccaaacaaaaagcaagccaataaacaagtctaaaaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 atctcaagcaaacatacaaactccaaacaaaaagcaagccaataaacaagtctaaaaact 283
Query: 121 caaaatttctttatcatgactctttttatctgctatgtgggccaattttattggcaaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 caaaatttctttatcatgactctttttatctgctatgtgggccaattttattggcaaaag 223
Query: 181 ttgtgtttaagacgaagactttggggcgggagagatgggctcagcagttaagagcatcga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 222 ttgtgtttaagacgaagactttggggcgggagagatgggctcagcagttaagagcattga 163
Query: 241 atgctcttttttaggtcctgagttcaaatcccagtgaccacatggtggctcacaaccatc 300
|||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 atgctcttctagaggtcctgagttcaaatcccagtgaccacatggtggctcacaaccatc 103
Query: 301 tgtaatgagatctgatgccctcttctggtgtgactgaagacagctacagtgtacttagat 360
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 102 tgtaatgagatctgatgccctcttctggtgtgtctgaagacagctacagtgtacttagat 43
Query: 361 ataataaataaatcttagccaggcagtggtggcgcacacctt 402
|||||||||||||||||||||||||||||||| |||||||||
Sbjct: 42 ataataaataaatcttagccaggcagtggtggtgcacacctt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 935
Length adjustment: 10
Effective length of query: 525
Effective length of database: 925
Effective search space: 485625
Effective search space used: 485625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
