Query= MSMg01no478_m08.b1 MSMg01no478_m08.b1 CHROMAT_FILE:
MSMg01no478_m08.b1 PHD_FILE: MSMg01no478_m08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:33 2005
(406 letters)
>mm_chr14_9755791_9756596
Length = 806
Score = 739 bits (382), Expect = 0.0
Identities = 400/406 (98%)
Strand = Plus / Plus
Query: 1 gtccctaccaccatttatgtatgacggtaatgacgagttttgtatattagttactatttt 60
||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 gtccctaccacaacttatgtatgactgtaatgacgagttttgtatattagttactatttt 260
Query: 61 aaatgaacgaaaggaatactatatttaaaggatcctggcagtgaatgcatttgtgacgtc 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatgaacaaaaggaatactatatttaaaggatcctggcagtgaatgcatttgtgacgtc 320
Query: 121 agaataattcaggaactgtaaattttatcctattaatttatcttttataaatttggcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaataattcaggaactgtaaattttatcctattaatttatcttttataaatttggcttt 380
Query: 181 tactgtatcctgagttgtgtttgaaatattgacttttccatcctcgcaatgttttcctgt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 tactgtatcctgagttgtgtttgaaatattgacttttccatcctcgcaatgtcttcctgt 440
Query: 241 tgatacgatattgttacttcatttctggaatctaattaaagttgatagtgctctaaggga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgatacgatattgttacttcatttctggaatctaattaaagttgatagtgctctaaggga 500
Query: 301 cagaaaatgtcaaaatccactagggttaattgttttgaatgtctgtttaaagtaaaagaa 360
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagaaaatgtcaacatccactagggttaattgttttgaatgtctgtttaaagtaaaagaa 560
Query: 361 catataaaaatcaatggaactgtggtagcagaattaaattatcctg 406
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catataaaaatcaatggaactgtggtagcagaattaaattatcctg 606
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 806
Length adjustment: 9
Effective length of query: 397
Effective length of database: 797
Effective search space: 316409
Effective search space used: 316409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_m08.g1 MSMg01no478_m08.g1 CHROMAT_FILE:
MSMg01no478_m08.g1 PHD_FILE: MSMg01no478_m08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:33 2005
(653 letters)
>mm_chr14_9953638_9954691
Length = 1054
Score = 1203 bits (622), Expect = 0.0
Identities = 646/654 (98%), Gaps = 1/654 (0%)
Strand = Plus / Minus
Query: 1 ccaggaaaatcagtatttacagtcatgaagaagaacaagaacaaaccactactacaatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 ccaggaaaatcagtatttacagtcatgaagaagaacaagaacaaaccactactacaatca 795
Query: 61 ctagcacagcccaccaatgcttctagactatcaaaaatatccaaatacctgacagtgaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 ctagcacagcccaccaatgcttctagactatcaaaaatatccaaatacctgacagtgaca 735
Query: 121 agagcctctgggatgctgttagtgatgtctcagaactctgtgaggcaacctgtaagcaga 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 734 agagcctctgggatgctgttagtgatgtctcagaactctgtgaggcaacctggaagcaga 675
Query: 181 tgtgccacaaggacactgttacttgctcggcttcaaataacacggggcaatcatttcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 tgtgccacaaggacactgttacttgctcggcttcaaataacacggggcaatcatttctcc 615
Query: 241 ttgtttccccttcagatctgtagctttactcctcaaggcaattcctctctgtcactggtt 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ttgcttccccttcagatctgtagctttactcctcaaggcaattcctctctgtcactggtt 555
Query: 301 cccactggcattcctgacatttcatgaaattctttcttcctgcagtttcattttctgctt 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 554 cccactggcattcctgacatttcatgaaattcttttttcctgcagtttcattttctgctt 495
Query: 361 tggccttgtggtgggtggggtagaatacaatagattttctagatttctaattttttgatt 420
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 494 tggccttgtggtgggtggggtagaatacaatagattttctagatttctaattctttgatt 435
Query: 421 gaattggtgtctctgaatggaagcagccca-ttttttttttacagtcattgagagcagaa 479
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 434 gaattggtgtctctgaatggaagcagcccatttttttttttacagtcattgagagcagaa 375
Query: 480 ctatccagcaagattctagttaatatgaacttcatatgtacagatccactcatttggcca 539
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ccatccagcaagattctagttaatatgaacttcatatgtacagatccactcatttggcca 315
Query: 540 tcaaggacaattataatagatttaaatgttcagaccattcttagttctctgactttcatt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tcaaggacaattataatagatttaaatgttcagaccattcttagttctctgactttcatt 255
Query: 600 ttaaattaagcagctggcagtggttcaataaaaagactttaatatttaaaaaag 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ttaaattaagcagctggcagtggttcaataaaaagactttaatatttaaaaaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1054
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1044
Effective search space: 671292
Effective search space used: 671292
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
