Query= MSMg01no481_f14.b1 MSMg01no481_f14.b1 CHROMAT_FILE:
MSMg01no481_f14.b1 PHD_FILE: MSMg01no481_f14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:58 2005
(667 letters)
>mm_chr14_37946676_37947741
Length = 1066
Score = 1251 bits (647), Expect = 0.0
Identities = 662/667 (99%), Gaps = 1/667 (0%)
Strand = Plus / Plus
Query: 1 ggccttggtgatgaaagtgggctggaaaaccctggaaggtagtgtccggagacacacaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggccttggtgatgaaagtgggctggaaaaccctggaaggtagtgtccggagacacacaag 260
Query: 61 ccttgcagccaacatggtgggcgatacaccggtttacctaagcagatctgaaatgctagt 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 ccttgcagccaacatggtgggcgatacaccggtttac-taagcagatctgaaatgctagt 319
Query: 121 tagaaaggtagagcggggaaaaatttagttaattaagaaggaaacatagtagccaaaatc 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tagaaaggtagaggggggaaaaatttagttaattaagaaggaaacatagtagccaaaatc 379
Query: 181 agaagaaacttaatttaaatagaagaaaaaactcagaacagtggcctcattaatttttaa 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 380 agaagaaacttaatttaaatagaagaaaaaaatcagaacagtggcctcattaatttttaa 439
Query: 241 tgctgtatccttcccttgttccttctgactcaagaaatctagtttagaatgggcagccaa 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 440 tgctgtatccttcccttgttccttctgactcaacaaatctagtttagaatgggcagccaa 499
Query: 301 tgatataaatccaagtttgaccagatatatgtaatacagaatcaatgttattatgttgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgatataaatccaagtttgaccagatatatgtaatacagaatcaatgttattatgttgac 559
Query: 361 acaatcacagattttacaaacatagctttgcctgatatttactccatcattcaatgagta 420
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 560 acaatcacagattttacaaacatagcttggcctgatatttactccatcattcaatgagta 619
Query: 421 aaagtaaaagaatctgtgtgacatttcagcacaagaaaaacatcatccagagaaaagata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aaagtaaaagaatctgtgtgacatttcagcacaagaaaaacatcatccagagaaaagata 679
Query: 481 actaaaccactcgagactaaaaaccatgaacaaaagccaggcatgcaaatgtctaccaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 actaaaccactcgagactaaaaaccatgaacaaaagccaggcatgcaaatgtctaccaag 739
Query: 541 taggtcagatgttacttccctttaagatacgacagatacattcaaattaaattattccac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 taggtcagatgttacttccctttaagatacgacagatacattcaaattaaattattccac 799
Query: 601 tacataacattcaatcaaaataaacaaaattgccctgctaggtttccctgttaaaacacc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tacataacattcaatcaaaataaacaaaattgccctgctaggtttccctgttaaaacacc 859
Query: 661 ttctggt 667
|||||||
Sbjct: 860 ttctggt 866
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1066
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1056
Effective search space: 693792
Effective search space used: 693792
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no481_f14.g1 MSMg01no481_f14.g1 CHROMAT_FILE:
MSMg01no481_f14.g1 PHD_FILE: MSMg01no481_f14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:58 2005
(636 letters)
>mm_chr14_38162561_38163600
Length = 1040
Score = 1210 bits (626), Expect = 0.0
Identities = 635/640 (99%), Gaps = 4/640 (0%)
Strand = Plus / Minus
Query: 1 caaagatagggaataagagtcaatgcagaccagggcttttcttgggtgcaatctgatctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 caaagatagggaataagagtcaatgcagaccagggcttttcttgggtgcaatctgatctc 781
Query: 61 tgccaccatggatctttgcattttgcggctacttggaaaaagtcagcctcttacaagggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 tgccaccatggatctttgcattttgcggctacttggaaaaagtcagcctcttacaagggc 721
Query: 121 ggaggctcctgagtcacaaggacagaagagaggatcaaagcatgctgacctagaggcccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 ggaggctcctgagtcacaaggacagaagagaggatcaaagcatgctgacctagaggcccc 661
Query: 181 aggctgaggtcggggcttcaggggccattctgacttggtaaagtgaaaaacataataaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 aggctgaggtcggggcttcaggggccattctgacttggtaaagtgaaaaacataataaaa 601
Query: 241 ataaaaataagttcagacactacaaagggctccctggaaacaagagaagcaacaagacat 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ataaaaataagtccagacactacaaagggctccctggaaacaagagaagcaacaagacat 541
Query: 301 gttcttagacagtccgcaagaactaatcaaaggctagtggacttctgaaaagatcactgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gttcttagacagtccgcaagaactaatcaaaggctagtggacttctgaaaagatcactgt 481
Query: 361 gcacctgtttcaaaagctgtctttgaaggtgttttagaagtcaaggacacttccagtgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gcacctgtttcaaaagctgtctttgaaggtgttttagaagtcaaggacacttccagtgga 421
Query: 421 agtcaactgcaaagttactcagagtgaaaacagaacagccacaaaaaggcctctttggcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 agtcaactgcaaagttactcagagtgaaaacagaacagccacaaaaaggcctctttggcc 361
Query: 481 ttctcagaggtaagccgcaggagctgcaagagacatgctgaggaaagaagccaccttgtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ttctcagaggtaagccgcaggagctgcaagagacatgctgaggaaagaagccaccttgtc 301
Query: 541 atcctgttaacctccagggcaagggcca----gctttccctgaggaacaattctaggtca 596
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 300 atcctgttaacctccagggcaagggccagcttgctttccctgaggaacaattctaggtca 241
Query: 597 aggttgagcccctggaatttgttccatgacttctgaacgt 636
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 aggttgagcccctggaatttgttccatgacttctgaacgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1040
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1030
Effective search space: 644780
Effective search space used: 644780
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
