Query= MSMg01no481_g09.b1 MSMg01no481_g09.b1 CHROMAT_FILE:
MSMg01no481_g09.b1 PHD_FILE: MSMg01no481_g09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:01 2005
(711 letters)
>mm_chr14_80563307_80564417
Length = 1111
Score = 1270 bits (657), Expect = 0.0
Identities = 699/721 (96%), Gaps = 13/721 (1%)
Strand = Plus / Plus
Query: 4 ggaattcatatgggttccaagtttatttgactggaatatccatgatatcttttctaatat 63
|||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 204 ggaattcatatggggtccaagtttatttgactggaatatccaagatatcttttctaatat 263
Query: 64 tggactatgtcactagattaatagaatcattgaagttttccacgtatatctgaaagtagc 123
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tggactatgtcactagatgaatagaatcattgaagttttccacgtatatctgaaagtagc 323
Query: 124 tagctaagctttcacacaataggtcaggtgggtttcaggaacattcccaaaagatcag-- 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tagctaagctttcacacaataggtcaggtgggtttcaggaacattcccaaaagatcagtc 383
Query: 182 -----------gtgcttacgagctctttgcttgcttcatgcatgctaatgtcccataggc 230
||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 384 caaattgtaaggtgcttacgagctctttgcttgcttcatgcatgctaatgccccataggc 443
Query: 231 caaagctacattgtacatggctaatgtccctgagaataagatgagagtcagggttctcta 290
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 444 caaagctacattgtacatggctaatgtccctgagaataagatgaaagtcagggttctcta 503
Query: 291 tgagctagtaaaacctcttactactgcagttggatggccgctaatagtcctcattactcc 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgagctagtaaaacctcttactactgcagttggatggccgctaatagtcctcattactcc 563
Query: 351 tactgaggtaattcaccctgctttcactgagagccccttaaagattgattctacaatagc 410
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 564 tactgaggtaattcaccctgctctcactgagagccccttaaagattgattctacaatagc 623
Query: 411 agcaggtctcaggagtttagaatgttgtcatctttattaggacaagtgagaacggagctt 470
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 624 agcaggtctcaggagtttagaatgttgtcatctttattaggacaagtgagaatggagctt 683
Query: 471 tcagtatggtagcttcagcctcagtacttgtgatctgaagcaacaggttgtgtgtcccct 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tcagtatggtagcttcagcctcagtacttgtgatctgaagcaacaggttgtgtgtcccct 743
Query: 531 ttttcatcattactaatatacaatggttgaacagagatggtagtaacacttcccattcat 590
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 744 ttttcatcattactaatatacaattgttgaacagagatggtagtaacacttcccattcat 803
Query: 591 gaaggaccagagggcccacacaggcctctacctgaggaatatcacattgcctcagttaga 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 gaaggaccagagggcccacacaggcctctacctgaggaatatcacattgcctcagttaga 863
Query: 651 ttacaggaccaatttcttttctcctgataaaacctgttctgccagcacccgaagttcctg 710
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 ttacaggaccaatttcctttctcctgataaaacctgttctgccagcacccgaagttcctg 923
Query: 711 a 711
|
Sbjct: 924 a 924
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 711
Length of database: 1111
Length adjustment: 10
Effective length of query: 701
Effective length of database: 1101
Effective search space: 771801
Effective search space used: 771801
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no481_g09.g1 MSMg01no481_g09.g1 CHROMAT_FILE:
MSMg01no481_g09.g1 PHD_FILE: MSMg01no481_g09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:01 2005
(645 letters)
>mm_chr14_80681595_80682639
Length = 1045
Score = 1058 bits (547), Expect = 0.0
Identities = 604/645 (93%), Gaps = 35/645 (5%)
Strand = Plus / Minus
Query: 1 tctgggcggcaggcttggcataaagactatcatttaccccacagtagacgttgagaagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 tctgggcggcaggcttggcataaagactatcatttaccccacagtagacgttgagaagca 608
Query: 61 tgaaaggcctcacttgaacaattatagttgcatgtaaaacgacaaattaaatttatgccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 tgaaaggcctcacttgaacaattatagttgcatgtaaaacgacaaattaaatttatgccc 548
Query: 121 acccctgaaattggcattgttgattagcatattaatgacacagatgttgttatgaatata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 acccctgaaattggcattgttgattagcatattaatgacacagatgttgttatgaatata 488
Query: 181 tggcagatatcatatatctgaccaaagaaaggactatgtttcaatttaattgtacaataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tggcagatatcatatatctgaccaaagaaaggactatgtttcaatttaattgtacaataa 428
Query: 241 attacatatgtttatgtgtctattcataacaattctcatgagttgacaaattttgataaa 300
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 427 attacatatgtttatgtgtctattcataacaattctcatgtgttgactaattttgataaa 368
Query: 301 ttagttcaaattaggagttgattaacatcaagtagaagctatgagttgatacatcaaatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ttagttcaaattaggagttgattaacatcaagtagaagctatgagttgatacatcaaatg 308
Query: 361 atagctgatgtaactgtctacagagcttatctcctgaaatttgtgataaccttcagagcc 420
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 307 atagctgatgtaactctctacagagctcatctcctgaaatttgtgataaccttcagagcc 248
Query: 421 ttatttctcaaactcttttcaaccccattgcagaacataagatgagtctcacaatttcag 480
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ttatttctcaaactcttttcaaccccattgcagaacataagatga--------------- 203
Query: 481 gtaagtgtatatgtaaccctgctgcttaaaagttgagtctgtcaaatctgaatttctcca 540
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ------------gtaaccctgctgcttaaaagttgagtctgtcaaatctgaatttctcca 155
Query: 541 cctaacttttgattgatggactggctagtggacaaatatacagagtagggctcccaaatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 cctaacttttgattgatggactggctagtggacaaatatacagagtagggctcccaaatt 95
Query: 601 caaacatatatatctatatatctacatagatatatagataaatac 645
|||||| |||||||||||| ||| ||||||||||||||
Sbjct: 94 caaaca--------tatatatctacacagagatatagataaatac 58
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
