CAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGGATCCGCGGA
ATTCTCTGTTTATTTCCAAACCCCATTTTTTAATGGGGTTATTTGATTTT
CTGGAGCAAAAGACACCATCAATAAGACAAAAAGACCACCAACAGATTGG
GAAAGGATCTTTTCTTATCCTTAATCCGATAGGGGACTAACATCCAATAT
ATATAAAGAACTCATGTTGTAATTTTGATGGAAACTGGGTTGAGTCTGTA
GATTGCTTTTTGTAGGATCATTATTACATTCATTATTTTATTTAGTTTTA
CTAATCATGATCATGGGAGAAAGTCGACCTGTCTATAAAACAAGTTACAG
CTAATGCTGATGAGGATGTGGAACAAGGGGAACATTCATGCAGTGTTGGT
GGGAGTCCAAAATTTGTAGCCAGTATGAATATCAATGTGCCTTTTCCTCA
GAAAGATAAAAATGAATCTACCTGAAGATCCAGCTCTTTCTGATGCATCC
CAAGTTCCAGATCTCCTCTTGTGGGCATATACAAAAATTATATTTCTTTA
TACCACAAGGATACTTGTTTAATTATGTTCATTGCTGCTCTATTTGTAAT
ATACAGGAGGATCAAAAAACATAGATGACCCTCTACAGAAGAATAGATAA
AGAAAATTGGGTAAATTTAAATGATGGATTATCACATAGATGTTACAAAA
ATGTCATCATAAGACTAGCAAGAAATAGATGTAACTAGAAAAAAAATTCC
TCTACAG

ATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTCTGCAGGTCTGGGGCTTCCCTC
GTTGGAAATATGGTAGAAAAGCAAGAAAGCTCAGTGCAGAAGGTCAGGGA
GGTTCAGATGTCTGTGACTACTCACAGCAATTTATTCCAGAATGTTTGAA
GTTACCAGAATTAGTTCCATATTCATGTTTTAATGTATTTGCTCATAACT
GGAAAATATTTTGATGGTGTTTCTCAGAAACAGGATTAGCTATCAAATTC
TTTTATTATCTATAGAATATGATCAACTAATCAAGTCACAGTTCTCTACT
GACATCTAGTTACAAATATGCTCGCATGGGGGAGTGGATCCTCAAAGGAG
TTTTGTATTTGTGACTAGACTGTAGAGATCAAATACTTTCTTAAATACTG
AGAAAATTATCTTTATCTAGTTCAATACATATTATTTTCTTTGAATCATA
TTTTGACCTAGAAGAGAAAACACTATTAAGTGTTATAGTGCTGATCACAC
AGACACACAGACACCACACACACACACACACACACACACACACACACATG
GAAATTTCTGGTTTCTTTGGAAACTCAGTTGTGTTAGGTGATATTTTTCT
GGAAATGGACTTGTGAGAGGATGTTTTGGCTGAAACAGACACATGGGAGG
ATGTTTTGCAGAGAACAAGCATATAGCATATTTCTGGAAGGTCCCTGG

Query= MSMg01no481_k20.g1 MSMg01no481_k20.g1 CHROMAT_FILE:
MSMg01no481_k20.g1 PHD_FILE: MSMg01no481_k20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:23 2005
         (672 letters)



>mm_chr14_110729465_110730536
          Length = 1072

 Score = 1160 bits (600), Expect = 0.0
 Identities = 644/668 (96%), Gaps = 15/668 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttctgcaggtctggggcttccctcgttggaaatatggtagaaaagcaagaaagctcagtg 60
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 669 ttctgcaggtctggggcttccctccttggaaatatggtagaaaagcaagaaagctcagtg 610

                                                                       
Query: 61  cagaaggtcagggaggttcagatgtctgtgactactcacagcaatttattccagaatgtt 120
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 609 cagaaggtcagggaggttcagatgtctgtgactactcacagtaatttattccagaatgtt 550

                                                                       
Query: 121 tgaagttaccagaattagttccatattcatgttttaatgtatttgctcataactggaaaa 180
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 549 tgaagttaccagaattagttccatatccatgttttaatgtatttgctcataactggaaaa 490

                                                                       
Query: 181 tattttgatggtgtttctcagaaacaggattagctatcaaattcttttattatctataga 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 489 tattttgatggtgtttctcagaaacaggattagctatcaaattcttttattacctataga 430

                                                                       
Query: 241 atatgatcaactaatcaagtcacagttctctactgacatctagttacaaatatgctcgca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 atatgatcaactaatcaagtcacagttctctactgacatctagttacaaatatgctcgca 370

                                                                       
Query: 301 tgggggagtggatcctcaaaggagttttgtatttgtgactagactgtagagatcaaatac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | 
Sbjct: 369 tgggggagtggatcctcaaaggagttttgtatttgtgactagactgtagagataaaagat 310

                                                                       
Query: 361 tttcttaaatactgagaaaattatctttatctagttcaatacatattattttctttgaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 309 tttcttaaatactgagaaaattatctttatctagttcaatacatattattttcttggaat 250

                                                                       
Query: 421 catattttgacctagaagagaaaacactattaagtgttatagtgctgatcacacagacac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 catattttgacctagaagagaaaacactattaagtgttatagtgctgatcacacagacac 190

                                                                       
Query: 481 acagacac---------------cacacacacacacacacacacacacacacacacatgg 525
           ||||||||               |||||||||||||||||||||||||||||||||||||
Sbjct: 189 acagacacacagacacacacacacacacacacacacacacacacacacacacacacatgg 130

                                                                       
Query: 526 aaatttctggtttctttggaaactcagttgtgttaggtgatatttttctggaaatggact 585
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 129 aaatttctggtttctttggaaactcagttgtgttaggtgctatttttctggaaatggact 70

                                                                       
Query: 586 tgtgagaggatgttttggctgaaacagacacatgggaggatgttttgcagagaacaagca 645
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  tgtgagaggatgttttggctgaaacagacacatgggaggatgttttgcagagaacaagca 10

                   
Query: 646 tatagcat 653
           ||||||||
Sbjct: 9   tatagcat 2


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 59
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space:   703044
Effective search space used:   703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)