Query= MSMg01no483_e18.b1 MSMg01no483_e18.b1 CHROMAT_FILE:
MSMg01no483_e18.b1 PHD_FILE: MSMg01no483_e18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:27 2005
(542 letters)
>mm_chr14_8782805_8783746
Length = 942
Score = 994 bits (514), Expect = 0.0
Identities = 532/538 (98%)
Strand = Plus / Minus
Query: 5 gaattccaaaaatggggtatggagtgttctgcatgccttctgctccagagctggctttag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 gaattccaaaaatggggtatggagtgttctgcatgccttctgctccagagctggctttag 683
Query: 65 gatgaagtcaaagtgatcagggccccaagacgaagcccagacatggagtataatctgggt 124
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 682 gatgaagtcaaagtgatcagggccccaagacgaagcccaggcatggagtataatctgggt 623
Query: 125 cagactttcttatttgttgtctagtcttgaggaaagtgggttgcactgttctttggcaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 cagactttcttatttgttgtctagtcttgaggaaagtgggttgcactgttctttggcaag 563
Query: 185 tggggtgcaggacccccttctgcaatgacattcttgtttggttatcgcttgagtagacca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tggggtgcaggacccccttctgcaatgacattcttgtttggttatcgcttgagtagacca 503
Query: 245 gaagcttaggagagccagtcagtcctgtccatgttcttgttctgtctgcaatgacctttg 304
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 502 gaagcttaggagagccagtcagtcctgtccatgttcttgttccgtctgcaatgacctttg 443
Query: 305 aaatcaagagtcttgatttgggcagagggctctgcactttttcggccccagcttgctttc 364
|||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 442 aaattaagagtcttgatttgggcagagggctctgcacttttttggccccagcttgctttc 383
Query: 365 tgaagatgtcccacatgacctcgagtcaagtctagggcaccaaggcacttggagtgagcg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tgaagatgtcccacatgacctcgagtcaagtctagggcaccaaggcacttggagtgagcg 323
Query: 425 gcaaggtttgggatggggacactggcccaccagcaggctgtggacattgtaaaaaatgaa 484
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gcaaggtttgggatggggacgctggcccaccagcaggctgtggacattgtaaaaaatgaa 263
Query: 485 ttataaactagcaacaaaagcaaccggaagggacacgtccagcattggctatcagatg 542
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ttacaaactagcaacaaaagcaaccggaagggacacgtccagcattggctatcagatg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 942
Length adjustment: 10
Effective length of query: 532
Effective length of database: 932
Effective search space: 495824
Effective search space used: 495824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no483_e18.g1 MSMg01no483_e18.g1 CHROMAT_FILE:
MSMg01no483_e18.g1 PHD_FILE: MSMg01no483_e18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:27 2005
(547 letters)
>mm_chr14_8715270_8716216
Length = 947
Score = 1056 bits (546), Expect = 0.0
Identities = 546/546 (100%)
Strand = Plus / Plus
Query: 1 accaggattcttcttactccagaactccatgaatctacgagaatgaaatcttaaaaaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accaggattcttcttactccagaactccatgaatctacgagaatgaaatcttaaaaaaga 260
Query: 61 acatttaaatctaattaattcattaattattagtagattcactggaaacctagtcctctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acatttaaatctaattaattcattaattattagtagattcactggaaacctagtcctctt 320
Query: 121 aaaatatcccaagatgagaaagttttgctaaagttttagacagaagtcattatattttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaatatcccaagatgagaaagttttgctaaagttttagacagaagtcattatattttgt 380
Query: 181 ttcaaatgcatttatctggaaatgatcttggtccgtgaaaactctaactatgttcttgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcaaatgcatttatctggaaatgatcttggtccgtgaaaactctaactatgttcttgga 440
Query: 241 atgatgaactttattctgagagtgcagcgaccttatctgcattactaaagaaaccccttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgatgaactttattctgagagtgcagcgaccttatctgcattactaaagaaaccccttg 500
Query: 301 cctagagatctaagtataagtggtcgttttattttctgttagaagggccaagtaccctac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctagagatctaagtataagtggtcgttttattttctgttagaagggccaagtaccctac 560
Query: 361 aagatgtgctggggtaatagtggtgcaaaatttgggggcagggtagggaggggagtggcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagatgtgctggggtaatagtggtgcaaaatttgggggcagggtagggaggggagtggcc 620
Query: 421 agccaatgactggtctcacttgaggcccatgctacaagagggatcccatgtctgacacta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agccaatgactggtctcacttgaggcccatgctacaagagggatcccatgtctgacacta 680
Query: 481 cctggatggcctggaaccggagactggatagctcagagatctgggttagaaccaagcaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cctggatggcctggaaccggagactggatagctcagagatctgggttagaaccaagcaca 740
Query: 541 cctggg 546
||||||
Sbjct: 741 cctggg 746
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space: 503169
Effective search space used: 503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
