Query= MSMg01no483_l05.b1 MSMg01no483_l05.b1 CHROMAT_FILE:
MSMg01no483_l05.b1 PHD_FILE: MSMg01no483_l05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:00 2005
(694 letters)
>mm_chr14_103955173_103956266
Length = 1094
Score = 1249 bits (646), Expect = 0.0
Identities = 679/690 (98%)
Strand = Plus / Minus
Query: 5 gaattctacttctgcgtcctgatgtttgagcttagatagtcccctgtctctcctctgccc 64
|||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 706 gaattctacttcggagtcctgatgtttgagcttagatagtcccctgcctctcctctgccc 647
Query: 65 ttccaggcaccccacacaagctttcccaagatctatgccaccacagtggtaactgtccgt 124
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 ttccaggcacctcacacaagctttcccaagatctatgccaccacagtggtaactgtccgt 587
Query: 125 ggatgtaactgtaaagagtcgcttcaaggaatacaaaggcagttttcaagaaaaatgtat 184
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 586 ggatgtaactgtaaagagtcgcttcaaggaatacacaggcagttttcaagaaaaatgtat 527
Query: 185 gaaaactgtatgtttcaaactatgatacaaagaccagattgaggtgaggggatccccttg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gaaaactgtatgtttcaaactatgatacaaagaccagattgaggtgaggggatccccttg 467
Query: 245 tagaaggggctgtttatgttgcccgtttttcttatcccttctggtccgagggttgttctg 304
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 466 tagaaggggctgtttatgttgcccgtttttcagatcccttctggtccgagggttgttctg 407
Query: 305 gggcaacgagcttgtctccccagacctgaattccagtttgagttggaggtcatttctcta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gggcaacgagcttgtctccccagacctgaattccagtttgagttggaggtcatttctcta 347
Query: 365 actgcaccacggccctgggttccatcaaggaccgccgacgcacacatccgtgagctttgc 424
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 actgcagcacggccctgggttccatcaaggaccgccgacgcacacatccgtgagctttgc 287
Query: 425 tctcacagttcaccgtgtgtcttccttgtctcgcacaaatagcatttccattccagcaat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 tctcacagttcaccgtgtgtcttccttgtctcgcacaaatagcatttccattccagcaat 227
Query: 485 atcaaaggagcttgtaggaaccaagaagtgagctctcagctgttcctgccaccatggctg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 atcaaaggagcttgtaggaaccaagaagtgagctctcagctgttcctgccaccatggctg 167
Query: 545 ctgaccgctgctgtgttaccctgcaccgagggacagactctcactcctctgaagccatac 604
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 166 ctgaccgctgctgtgttaccctgcaccgagggatggactctcactcctctgaagccatac 107
Query: 605 gcttaaatatcctcctgcttctacaagttgcctaggtcatggttttttatcacagagata 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 gcttaaatatcctcctgcttctacaagttgcctaggtcatggttttttatcacagagata 47
Query: 665 ggaaggtcgttaatacagtcaccttatcaa 694
|||||||| |||||||||||||||||||||
Sbjct: 46 ggaaggtcattaatacagtcaccttatcaa 17
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 694
Length of database: 1094
Length adjustment: 10
Effective length of query: 684
Effective length of database: 1084
Effective search space: 741456
Effective search space used: 741456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no483_l05.g1 MSMg01no483_l05.g1 CHROMAT_FILE:
MSMg01no483_l05.g1 PHD_FILE: MSMg01no483_l05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:00 2005
(569 letters)
>mm_chr14_103893641_103894612
Length = 972
Score = 1075 bits (556), Expect = 0.0
Identities = 567/572 (99%), Gaps = 3/572 (0%)
Strand = Plus / Plus
Query: 1 tcagtattcagagctgagagggggtaaaaagtcattatagtcttc---tgttgttgttat 57
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 tcagtattcagagctgagagggggtaaaaagtcattatagtcttctgttgttgttgttat 260
Query: 58 tgttattaatactattagaaggtgatgagggaggtgcttatgtgctacacatggggccag 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgttattaatactattagaaggtgatgagggaggtgcttatgtgctacacatggggccag 320
Query: 118 aggacacttttgtggagcaagttctttcttttcctggactctaggctcaattcattcatt 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggacacttttgtggagcaagttctttcttttcctggactctaggctcaattcattcatt 380
Query: 178 gcatgtattcatttattattctacatgtactttcagatataatttcaggcagacatgggg 237
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 gcatgtattcatttattattctacatatactttcagatataatttcaggcagacatgggg 440
Query: 238 gcctgacctggggtatggttgatatgtacagtcacactccattgggaaaaagtgattttc 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcctgacctggggtatggttgatatgtacagtcacactccattgggaaaaagtgattttc 500
Query: 298 cctttgccatcaggaatgaattgcaaataacttcttggttagggttgggactttgtgtcc 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctttgccatcaggaatgaattgcaaataacttcttggttagggttgggactttgtgtcc 560
Query: 358 acttccccttctcagtgctgggaccccatcagacatgaacttgtgcaaggtcctttgtgt 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acttccccttctcagtgctgggaccccatcagacatgaacttgtgcaaggtcctttgtgt 620
Query: 418 ggtaccacagtctctgtggtctcattggtccagttatgtcttgaagacagtttacttata 477
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggtaccacagtctctgtggtctccttggtccagttatgtcttgaagacagtttacttata 680
Query: 478 tacccaccccttctggttcttacactctttttgccttctcttccagatgggtccctgagc 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tacccaccccttctggttcttacactctttttgccttctcttccagatgggtccctgagc 740
Query: 538 cttgaggggaggggtttagtgaagacctcagt 569
||||||||||||||||||||||||||||||||
Sbjct: 741 cttgaggggaggggtttagtgaagacctcagt 772
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 972
Length adjustment: 10
Effective length of query: 559
Effective length of database: 962
Effective search space: 537758
Effective search space used: 537758
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
