Query= MSMg01no485_a14.b1 MSMg01no485_a14.b1 CHROMAT_FILE:
MSMg01no485_a14.b1 PHD_FILE: MSMg01no485_a14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:50 2005
(465 letters)
>mm_chr14_71759415_71760280
Length = 866
Score = 855 bits (442), Expect = 0.0
Identities = 460/468 (98%), Gaps = 5/468 (1%)
Strand = Plus / Minus
Query: 1 tgacttagcaggagcttctaaaagcccttcaacagctggctgaaacccagaaggtaatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 tgacttagcaggagcttctaaaagcccttcaacagctggctgaaacccagaaggtaatga 607
Query: 61 gcatggatggagccaagcctctagatgactgttaatttgattaataccaagtatctatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gcatggatggagccaagcctctagatgactgttaatttgattaataccaagtatctatca 547
Query: 121 taattattgaaacattttgctctactttcacccatctttgcccccaaccaacttgacttt 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 546 taattattgaaacattttgctctactttaacccatctttgcccccaaccaacttgacttt 487
Query: 181 ctggccctctgcttccatctggttcaatccccaccgcctctttctttcttcacggggctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 ctggccctctgcttccatctggttcaatccccaccgcctctttctttcttcacggggctg 427
Query: 241 tttt---ttattttacttccagcaaacaaaatccactattgggagcttttgcttttgaag 297
|| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 --ttcaattaatttacttccagcaaacaaaatccactattgggagcttttgcttttgaag 369
Query: 298 tctcaaggctgattccctgctgtcttataaccacttcaacagccatgagtcaagagaaaa 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tctcaaggctgattccctgctgtcttataaccacttcaacagccatgagtcaagagaaaa 309
Query: 358 tcattaggtaggagagcaacccactccacggctccctcatgacccaagtgcacttgcaga 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tcattaggtaggagagcaacccactccacggctccctcatgacccaagtgcacttgcaga 249
Query: 418 cttgcatggctgcagagcaattgcaggcacatgtagtttgtgcaggaa 465
|||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 248 cttgcatggctgcagagcaattgcagacacatgtagtttgtgcaggaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 866
Length adjustment: 10
Effective length of query: 455
Effective length of database: 856
Effective search space: 389480
Effective search space used: 389480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no485_a14.g1 MSMg01no485_a14.g1 CHROMAT_FILE:
MSMg01no485_a14.g1 PHD_FILE: MSMg01no485_a14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:50 2005
(289 letters)
>mm_chr14_71615820_71616508
Length = 689
Score = 493 bits (255), Expect = e-144
Identities = 261/263 (99%)
Strand = Plus / Plus
Query: 1 cttcttcccatcctcctccacaggttccatttggatatgggacagtctgtggttatttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttcttcccatcctcctccacaggttccatttggatatgggacagtctgtggttatttac 260
Query: 61 caacattttatcaggagtacaggttaccagactccctgagggagggatgcagcagctggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caacattttatcaggagtacaggttaccagactccctgagggagggatgcagcagctggg 320
Query: 121 ggtttaagaattatttctggaaaataaaagccattgagaaattcctcaggggatggcaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtttaagaattatttctggaaaataaaagccattgagaaattcctcaggggatggcaag 380
Query: 181 atgtcctctgccaactaatggagcagaggggacactggttccttgtgtgtgtgtgtttgt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 atgtcctctgccaactaatggagcagaggggacactggttccttgtgtgtgtgtgtgtgt 440
Query: 241 gtttgtgtgtgtgtgtgtgtgtg 263
|| ||||||||||||||||||||
Sbjct: 441 gtgtgtgtgtgtgtgtgtgtgtg 463
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
