TTTTAAAATCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXGCGCGGAATTCATTTCTATTCAAAAAGCTAGCAAGAGCAGAGGCAAAG
TTAGATATGTAACATCAATACTGAACACAGGATAAAAACACCATTATCCT
GAAAAGCAGCTGTATTACTAAACATCACCAGTTGCACAGTGCAGGCTTTC
TCAGCATTCTTTTAATGCCTGCAATTTATTGAGCCATGGGTGACTTTTGG
ACTTGTTAGATTATTCTGCCTCTGTGGCAGGGGTTCTAGGCTGGTCTAGG
CAGCTTCAGTCTGAGTATACTCAGGCTTCTCATTGCCATCTAGTGCATTT
CTCATGCTAATTCTGGAGCTTTTGTGTGGTTTTCCTCTCTGTCAAACTCT
CCAATCTCCTTCCTAGGAGAATGTATACTTGTGGTGACATTGACACAGAA
GGTAGCATTCTTGTCTTAGCCAGTCATAAATGTCAAAAGTAGATCATTTT
AGTTTCTGTCAGTATACAATGTATAAATTTCTCTTATTGAACTAAGAATC
TCAATTACAAAATTTAATAGCTGTATTTTTTCAATTTCAATTTACATTTT
TGTATTTGAGTAAATTAATTTTTATTTTTAAATTATCTTGCAATATGTAG
CAATTATACATATTTATCACATTCATTAAATGTTGATAGCATTTTGATAG
CATCCTTCGTGTTTTTCTTTAGATTTTTAC

NNNNCCCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCTTCGCCTAGGACGTGTCAC
TCCCTGATTGGCTGCAGCCCATCGGCCGAGTTGACGTCACGGGGAAGACA
GAGCACATGGAGTGGAGAACCACCCTCGGCACATGTGCAGATTATTTGTT
TACCACTTAGAACACAGCTGTCAGCGCCATCTTGTAACGGCGAATGTGGG
CGCGGCTCCCAACAGAGTTACACCAAAATATTTTATGTTATTTCTGGCTA
TGGTTAAGGATGTTATTTCCATTATTTTTTTTTCTTAGCCTATTTATTGT
GTGCGTATAGAAGGACTATTGAAGTTTTTCCAGTTAATATTGTATTCAAC
CACTTTTCTGACTGTTTGTTAGATATATGAGTTTCATGCATATATTTTGG
GGTTACTTATGTAACTATCAGAACATCTGCAAATAATCTTTGACATCTTC
TTTTCCAATTTGTATCCCCTTGATCTCCTTTAGTTGCATTAATGTGTTAG
CTGAAACTTAAACAACTATATTGAATAAATGGAGAAAGAGTGGACAGCCT
TGTCTTGTCCCCTCTTTCAGTGAAATTGCTTTAAGTTTCCCTACATTTAT
TTTGATGTTGGCTACTGGTATATTACCTTTATTATTTTTTTGGTATGTCC
TATGTAGACCTGATCCCTCTAG

Query= MSMg01no485_h13.b1 MSMg01no485_h13.b1 CHROMAT_FILE:
MSMg01no485_h13.b1 PHD_FILE: MSMg01no485_h13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:26 2005
         (669 letters)



>mm_chr14_95878061_95879129
          Length = 1069

 Score = 1253 bits (648), Expect = 0.0
 Identities = 663/668 (99%)
 Strand = Plus / Minus

                                                                       
Query: 2   ggaattcatttctattcaaaaagctagcaagagcagaggcaaagttagatatgtaacatc 61
           ||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 ggaattcatttctagagaaaaagctagcaagagcagaggcaaagttagatatgtaacatc 696

                                                                       
Query: 62  aatactgaacacaggataaaaacaccattatcctgaaaagcagctgtattactaaacatc 121
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 aatattgaacacaggataaaaacaccattatcctgaaaagcagctgtattactaaacatc 636

                                                                       
Query: 122 accagttgcacagtgcaggctttctcagcattcttttaatgcctgcaatttattgagcca 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 accagttgcacagtgcaggctttctcagcattcttttaatgcctgcaatttattgagcca 576

                                                                       
Query: 182 tgggtgacttttggacttgttagattattctgcctctgtggcaggggttctaggctggtc 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tgggtgacttttggacttgttagattattctgcctctgtggcaggggttctaggctggtc 516

                                                                       
Query: 242 taggcagcttcagtctgagtatactcaggcttctcattgccatctagtgcatttctcatg 301
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 515 taggcagcttcagtctgagtatactcagccttctcattgccatctagtgcatttctcatg 456

                                                                       
Query: 302 ctaattctggagcttttgtgtggttttcctctctgtcaaactctccaatctccttcctag 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ctaattctggagcttttgtgtggttttcctctctgtcaaactctccaatctccttcctag 396

                                                                       
Query: 362 gagaatgtatacttgtggtgacattgacacagaaggtagcattcttgtcttagccagtca 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gagaatgtatacttgtggtgacattgacacagaaggtagcattcttgtcttagccagtca 336

                                                                       
Query: 422 taaatgtcaaaagtagatcattttagtttctgtcagtatacaatgtataaatttctctta 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 taaatgtcaaaagtagatcattttagtttctgtcagtatacaatgtataaatttctctta 276

                                                                       
Query: 482 ttgaactaagaatctcaattacaaaatttaatagctgtattttttcaatttcaatttaca 541
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ttgaactaagaatctcaattacaaaatttaatagctgtattttttcaatttcaatttaca 216

                                                                       
Query: 542 tttttgtatttgagtaaattaatttttatttttaaattatcttgcaatatgtagcaatta 601
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 tttttgtatttgagtaaattaatttttatttttaaattatcttgcaatatgtagcaatta 156

                                                                       
Query: 602 tacatatttatcacattcattaaatgttgatagcattttgatagcatccttcgtgttttt 661
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 tacatatttatcacattcattaaatgttgatagcattttgatagcatccttcgtgttttt 96

                   
Query: 662 ctttagat 669
           ||||||||
Sbjct: 95  ctttagat 88


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1069
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1059
Effective search space:   697881
Effective search space used:   697881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)