Query= MSMg01no485_j23.b1 MSMg01no485_j23.b1 CHROMAT_FILE:
MSMg01no485_j23.b1 PHD_FILE: MSMg01no485_j23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:38 2005
(361 letters)
>mm_chr14_24350111_24350872
Length = 762
Score = 638 bits (330), Expect = 0.0
Identities = 354/362 (97%), Gaps = 1/362 (0%)
Strand = Plus / Plus
Query: 1 gggtgagctttgagatctcatatgctccagctatgccccgtgtggtacacagtcacttct 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 gggtgagctttgagatctcatatgctccagctatgcccagtgtggtacacagtcacttct 260
Query: 61 actgcctgtggatcaagacgtacaactctcagcccattcaccagcaccacatctgcccgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actgcctgtggatcaagacgtacaactctcagcccattcaccagcaccacatctgcccgc 320
Query: 121 aggctgccgtgcttcccgccatgatgataatggactgaacatctgaactttaaggcagcc 180
|||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 aggctgccatgcttcccaccatgatgataatggactgaacgtctgaactttaaggcagcc 380
Query: 181 ccaattaaatggtttcctctataagggttactgccgtcagaatatctcttcacagcaaca 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccaattaaatgttttcctctataagggttactgccgtcagaatatctcttcacagcaaca 440
Query: 241 gaaaccctaagacacagccccggcagaagctaatccttctctttgggtaatccatctatg 300
|||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaaccctaagacacaacccccgcagaagctaatccttctctttgggtaatccatctatg 500
Query: 301 gtaacactgccctctttctgcctatttctttctcttggg-aatatattatctactttcta 359
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 501 gtaacactgccctctttctgcctatttctttctcttgggtaatatattatctactttcta 560
Query: 360 at 361
||
Sbjct: 561 at 562
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 361
Length of database: 762
Length adjustment: 9
Effective length of query: 352
Effective length of database: 753
Effective search space: 265056
Effective search space used: 265056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no485_j23.g1 MSMg01no485_j23.g1 CHROMAT_FILE:
MSMg01no485_j23.g1 PHD_FILE: MSMg01no485_j23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:38 2005
(299 letters)
>mm_chr14_24508308_24509006
Length = 699
Score = 516 bits (267), Expect = e-151
Identities = 291/299 (97%)
Strand = Plus / Minus
Query: 1 caggcagttccagagagggactgtcagaggagagctaggtaaccttgcttaggaggagaa 60
||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 499 caggcagttccagagagagactgtcagaggagagctaggcaaccttgcttaggaggagta 440
Query: 61 aaaacccaaataggacaccataagtcttatcaggagaagggctggagctcaaatttcaga 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 439 aaaacccaaataggacaccataagtcttattaggagaagggctggagctcaaatttcaga 380
Query: 121 aacgcgggtggggtggattctggaagagaccaattactgcccaaaaagggagagaggtag 180
|| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 379 aatgggggtggggtggattctggaagagaccaattactgccaaaaaagggagagaggtag 320
Query: 181 gctgcctccagctcttccctttcttttgggggccaccaccactgactgaaccaaagtgaa 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gctgcctcaagctcttccctttcttttgggggccaccaccactgactgaaccaaagtgaa 260
Query: 241 cagttggcaagagtacctcagaaacagctcttgtggtttaaactctcaagtcaagagcc 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 cagttggcaagagtacctcagaaacagctcttgtggtttaaactctcaagtcaagagcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 699
Length adjustment: 9
Effective length of query: 290
Effective length of database: 690
Effective search space: 200100
Effective search space used: 200100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
