GGGACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTGTAATTACGTGTGACTGCGTTGGTATACCTGTGATTATTTG
CTGATAGGATCCTAGAGTAATAAGTTGTTAGGTTTTATTATTTTCATATT
TCAAAATTCTGTTGTCAATTATTTAACAGCCCCTAGCAATGATGTGCTAA
CTTATACAGCAGCCTATTCTTGAACGAGGATATTCTTTTAGCTCTAAGCA
GTTTGGCTTTTTTAATATATGTAAATTCAATTCTTGAGCATAGAAGCTTA
TTGCATTCTCATTTGCAGCTATTTGGTTATTATTTACATTTAATAATACT
TTCTTAAATATTTCTAGAATAATAGGTTTTTACTTAAATTATTGATTGCT
CTCTCTCTGAGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTCTTT
AAAAGTAACACGATATCTATAACTTAATTCTTCCCTCTCTCTCTTTATTG
TCTAGGGGAACTTTACCTGTAGCTTTACAGAGCCCGGAATAGCTTAGCCA
TGTTAGAGATTACAGTGTCATCATGTTGCATGGCTTTACTATAGAGGATT
CTTGTTCCTATTTCAAATCAGGGGATAGTAACTCTTTGATAAAAATTCCC
ACAGATAGTAACAATAATAATTAATAATAATGATAGTAATAAATATAATT
TTTCTGTTCCTTCGTATTACTATCATAAN

NCCGATGCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXGTCCAGACCTCTTCANCTGGNGAATG
GTGGTAATGAAGTGTTCCCGTAAAATANACTGTTGANAAAGATTNCACTG
CGTGAATTCAAAACTCTTCANNCTGGGAACAGGGTACCCCTAAGTATAGC
TTTACAAGGTAATCTGGTTTTGAACTTCTAAACAAATTCAAAACAGCCCT
TCAAAATAAAATGGAAAAAACCTTTCCAAGAAAACCCGGCCTTGAACTTT
CCAAAAAAATTCAAAAATTTTTTCTAAAATTAAAGGGGAAAAACCTTTTA
CAAAAAATTTTGCCCTTAAATTTTCCCCTAGGGTAAAACACCTTTTTGTC
CCCTTTCCCACGGGTTCACACCCCTTAAAACGGGGGGGAAAAAAATCTCG
GGAAAAAATTTCGGCGGCCCCTCCCCAAAAAAAAAACCCCCCAAAAAAAA
AAAACCCCCCACAAAAAAAAAATATGGGCCCCACAAAAAAAAAAAAAAAA
CCCTCTTCTTCCTTTTTTTTTTTTCCCCCAAAAAAAAAATTTTCCCCCCC
AAAAAAAAAACCCCCGGGGTTTTTTTTTTTTGGGGCCAAGAAACAAAAAA
AAAAAAAAAAAAATCCCACCCCCCNCCCCTTTTTTTTAAAAAAGAAAACC
CCCCCCCCCCGGGGTCCACAACCACATACCCNCCTTTTTTTTTTTATCAA
AAAAAAAAAAAAATTTTTTTTTNNCACTCCCCCCCCCCCCTTTCNTTNCC
NCAACAAAAAAATAACCCGCCCCGCCGGGCCGGT

Query= MSMg01no485_m05.b1 MSMg01no485_m05.b1 CHROMAT_FILE:
MSMg01no485_m05.b1 PHD_FILE: MSMg01no485_m05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:50 2005
         (537 letters)



>mm_chr14_84653230_84654166
          Length = 937

 Score = 1004 bits (519), Expect = 0.0
 Identities = 532/537 (99%), Gaps = 2/537 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgtgactgcgttggtatacctgtgattatttgctgataggatcctagagtaataagttgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tgtgactgcgttggtatacctgtgattatttgctgataggatcctagagtaataagttgt 483

                                                                       
Query: 61  taggttttattattttcatatttcaaaattctgttgtcaattatttaacagcccctagca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 taggttttattattttcatatttcaaaattctgttgtcaattatttaacagcccctagca 423

                                                                       
Query: 121 atgatgtgctaacttatacagcagcctattcttgaacgaggatattcttttagctctaag 180
           |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 422 atgatgtggtaacttatacagcagcctattcttgcacgaggatattcttttagctctaag 363

                                                                       
Query: 181 cagtttggcttttttaatatatgtaaattcaattcttgagcatagaagcttattgcattc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 cagtttggcttttttaatatatgtaaattcaattcttgagcatagaagcttattgcattc 303

                                                                       
Query: 241 tcatttgcagctatttggttattatttacatttaataatactttcttaaatatttctaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tcatttgcagctatttggttattatttacatttaataatactttcttaaatatttctaga 243

                                                                       
Query: 301 ataataggtttttacttaaattattgattgctctctctctgagtgtgtgtgtgtgtgtgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ataataggtttttacttaaattattgattgctctctctctgagtgtgtgtgtgtgtgtgt 183

                                                                       
Query: 361 gtttgtgtgtgtgtgtgtctttaaaagtaacacgatatctataacttaattcttccctct 420
           ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gt--gtgtgtgtgtgtgtctttaaaagtaacacgatatctataacttaattcttccctct 125

                                                                       
Query: 421 ctctctttattgtctaggggaactttacctgtagctttacagagcccggaatagcttagc 480
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 124 ctctctttattgtctaggggaactttacctgtagctttacagagcccagaatagcttagc 65

                                                                    
Query: 481 catgttagagattacagtgtcatcatgttgcatggctttactatagaggattcttgt 537
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64  catgttagagattacagtgtcatcatgttgcatggctttactatagaggattcttgt 8


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 937
Length adjustment: 10
Effective length of query: 527
Effective length of database: 927
Effective search space:   488529
Effective search space used:   488529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)