Query= MSMg01no485_o14.b1 MSMg01no485_o14.b1 CHROMAT_FILE:
MSMg01no485_o14.b1 PHD_FILE: MSMg01no485_o14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:03 2005
(241 letters)
>mm_chr14_26520464_26521104
Length = 641
Score = 458 bits (237), Expect = e-133
Identities = 240/241 (99%)
Strand = Plus / Plus
Query: 1 gaagacaggactggggcaagcacatgactaagagtttccttaggtgggtagggacatagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaagacaggactggggcaagcacatgactaagagtttccttaggtgggtagggacatagc 260
Query: 61 atagctcatggagaagggatgtgggctctggctgcggtgagtattgcattcatgccatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atagctcatggagaagggatgtgggctctggctgcggtgagtattgcattcatgccatat 320
Query: 121 agaattcctgaatcaggtgatgtcaggttagaggtaggtgtggtcattctgacatcatag 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 agaattcctgaatcaggtgatgtcaggttagaggtaggcgtggtcattctgacatcatag 380
Query: 181 aggttatgctgagtcttcagagtcttggagtttccatgaagtcagagctcagctccttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggttatgctgagtcttcagagtcttggagtttccatgaagtcagagctcagctccttgg 440
Query: 241 g 241
|
Sbjct: 441 g 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no485_o14.g1 MSMg01no485_o14.g1 CHROMAT_FILE:
MSMg01no485_o14.g1 PHD_FILE: MSMg01no485_o14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:03 2005
(594 letters)
>mm_chr14_26661888_26662877
Length = 990
Score = 1114 bits (576), Expect = 0.0
Identities = 588/594 (98%), Gaps = 4/594 (0%)
Strand = Plus / Minus
Query: 1 ccaacaactgacggaagcaagaaaataatgaaggagaataatgggagcaggctgagggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 ccaacaactgacggaagcaagaaaataatgaaggagaataatgggagcaggctgagggtg 731
Query: 61 agcaagacacctggcccttccccgcaaggatctgggtccaagactagttagtcatccttt 120
|||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 730 agcaagacacctggcccttccccgcaaggatctgggtccaagtc----tagtcatccttt 675
Query: 121 cgacaatgacacacaccgccatcaacaaagttgaacagcccaacccagggccgcatttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 cgacaatgacacacaccgccatcaacaaagttgaacagcccaacccagggccgcatttgt 615
Query: 181 agctttcttccgcaataaggcagcctcggggcaaggcagcctccgagcaagcagggagca 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 614 agctttcttccgcaataaggcagcctcggggcaaggcagcctcggagcaagcagggagca 555
Query: 241 agctagttgaatcctgtaaagggatcagacaggtaggctgacactctaggtgtagggtct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 agctagttgaatcctgtaaagggatcagacaggtaggctgacactctaggtgtagggtct 495
Query: 301 gggaaacccaatctccaaggacgcccactgattagccggcggggagaaaaatctctaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 gggaaacccaatctccaaggacgcccactgattagccggcggggagaaaaatctctaaag 435
Query: 361 agaatgtgcccagcatgagtttagctattctcccccagatttgtttgacaccttgtacgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 agaatgtgcccagcatgagtttagctattctcccccagatttgtttgacaccttgtacgc 375
Query: 421 ctttaggagactggcctgagcccacgggacgtccgggttgccaagctcaagcaagcgttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ctttaggagactggcctgagcccacgggacgtccgggttgccaagctcaagcaagcgttc 315
Query: 481 ttgaagactctggaacgagaagcgggggcaggggcagagggatcctagctggatacgcgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ttgaagactctggaacgagaagcgggggcaggggcagagggatcctagctggatacgcgg 255
Query: 541 taaggaagacaggcaggcaacacggcatctggcacaatcgtgcattctctggac 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 taaggaagacaggcaggcaacacggcatctggcacaatcgtgcattctctggac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 990
Length adjustment: 10
Effective length of query: 584
Effective length of database: 980
Effective search space: 572320
Effective search space used: 572320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
